Protein–RNA interactions for Protein: Q9ESN2

Trim39, E3 ubiquitin-protein ligase TRIM39, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39Q9ESN2 Gm38200-201ENSMUST00000192083 2111 ntBASIC8.18□□□□□ -1.1
Trim39Q9ESN2 Gm6348-201ENSMUST00000200751 1443 ntBASIC8.18□□□□□ -1.1
Trim39Q9ESN2 Gm6468-201ENSMUST00000201076 1443 ntBASIC8.18□□□□□ -1.1
Trim39Q9ESN2 Gm6346-201ENSMUST00000201146 1443 ntBASIC8.18□□□□□ -1.1
Trim39Q9ESN2 Olfr1285-202ENSMUST00000220153 1430 ntTSL 5 BASIC8.18□□□□□ -1.1
Trim39Q9ESN2 Slc30a6-202ENSMUST00000179074 2171 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
Trim39Q9ESN2 Kng2-202ENSMUST00000100046 2294 ntAPPRIS P3 TSL 1 (best) BASIC8.18□□□□□ -1.1
Trim39Q9ESN2 Pkib-202ENSMUST00000075992 5317 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
Trim39Q9ESN2 Gm42601-201ENSMUST00000197025 1541 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
Trim39Q9ESN2 Skap2-201ENSMUST00000078214 1583 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
Trim39Q9ESN2 Rdh12-202ENSMUST00000122227 1624 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
Trim39Q9ESN2 Mas1-204ENSMUST00000161747 1687 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
Trim39Q9ESN2 Mas1-208ENSMUST00000165020 1675 ntAPPRIS P1 TSL 5 BASIC8.18□□□□□ -1.1
Trim39Q9ESN2 Mas1-209ENSMUST00000167152 1670 ntAPPRIS P1 TSL 5 BASIC8.18□□□□□ -1.1
Trim39Q9ESN2 Zkscan5-201ENSMUST00000031601 3469 ntAPPRIS ALT2 TSL 1 (best) BASIC8.17□□□□□ -1.1
Trim39Q9ESN2 Cep170-215ENSMUST00000195717 6967 ntAPPRIS P2 TSL 5 BASIC8.17□□□□□ -1.1
Trim39Q9ESN2 Trps1-206ENSMUST00000184458 5293 ntAPPRIS ALT2 TSL 1 (best) BASIC8.17□□□□□ -1.1
Trim39Q9ESN2 Stau2-207ENSMUST00000131257 3616 ntTSL 5 BASIC8.17□□□□□ -1.1
Trim39Q9ESN2 Pilrb1-206ENSMUST00000199387 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC8.17□□□□□ -1.1
Trim39Q9ESN2 Mroh2b-201ENSMUST00000045736 4829 ntAPPRIS P1 TSL 5 BASIC8.17□□□□□ -1.1
Trim39Q9ESN2 C1qtnf7-201ENSMUST00000076939 3879 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
Trim39Q9ESN2 4930433I11Rik-202ENSMUST00000206529 2963 ntAPPRIS ALT2 TSL 5 BASIC8.17□□□□□ -1.1
Trim39Q9ESN2 Gm21569-201ENSMUST00000222683 2036 ntBASIC8.17□□□□□ -1.1
Trim39Q9ESN2 B930018H19Rik-201ENSMUST00000211381 2121 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
Trim39Q9ESN2 4930551I15Rik-201ENSMUST00000219700 2143 ntTSL 5 BASIC8.17□□□□□ -1.1
Trim39Q9ESN2 Arsg-203ENSMUST00000106697 3232 ntAPPRIS P1 TSL 5 BASIC8.17□□□□□ -1.1
Trim39Q9ESN2 Olfr958-202ENSMUST00000215505 3514 ntAPPRIS P1 TSL 5 BASIC8.17□□□□□ -1.1
Trim39Q9ESN2 Slc7a2-204ENSMUST00000118432 3681 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
Trim39Q9ESN2 Slc13a1-201ENSMUST00000031713 2495 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
Trim39Q9ESN2 Efcab1-201ENSMUST00000090277 2494 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
Trim39Q9ESN2 Zkscan8-201ENSMUST00000045228 8805 ntAPPRIS P2 TSL 1 (best) BASIC8.17□□□□□ -1.1
Trim39Q9ESN2 Synj2-205ENSMUST00000115786 2531 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
Trim39Q9ESN2 Sult2a4-201ENSMUST00000108520 984 ntAPPRIS ALT2 TSL 5 BASIC8.17□□□□□ -1.1
Trim39Q9ESN2 Gm6964-201ENSMUST00000117206 437 ntBASIC8.17□□□□□ -1.1
Trim39Q9ESN2 Gm6654-201ENSMUST00000118950 348 ntBASIC8.17□□□□□ -1.1
Trim39Q9ESN2 Olfr122-201ENSMUST00000119082 993 ntBASIC8.17□□□□□ -1.1
Trim39Q9ESN2 Gm13651-201ENSMUST00000119086 1110 ntBASIC8.17□□□□□ -1.1
Trim39Q9ESN2 Olfr634-ps1-201ENSMUST00000119267 955 ntAPPRIS P1 BASIC8.17□□□□□ -1.1
Trim39Q9ESN2 Gm15361-201ENSMUST00000119320 444 ntBASIC8.17□□□□□ -1.1
Trim39Q9ESN2 Gm15465-201ENSMUST00000120368 358 ntBASIC8.17□□□□□ -1.1
Trim39Q9ESN2 Gm7212-201ENSMUST00000120817 348 ntBASIC8.17□□□□□ -1.1
Trim39Q9ESN2 Gm9855-201ENSMUST00000121229 1194 ntBASIC8.17□□□□□ -1.1
Trim39Q9ESN2 Dcdc5-203ENSMUST00000126340 396 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
Trim39Q9ESN2 Gm8817-201ENSMUST00000126769 693 ntTSL 2 BASIC8.17□□□□□ -1.1
Trim39Q9ESN2 Rptoros-201ENSMUST00000127450 1174 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
Trim39Q9ESN2 4930570D08Rik-201ENSMUST00000130431 196 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
Trim39Q9ESN2 Gm13565-201ENSMUST00000133596 700 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
Trim39Q9ESN2 Ube2uos-201ENSMUST00000142634 608 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
Trim39Q9ESN2 Defa27-201ENSMUST00000167683 282 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
Trim39Q9ESN2 Gm2959-201ENSMUST00000169844 621 ntBASIC8.17□□□□□ -1.1
Trim39Q9ESN2 Rpl6l-201ENSMUST00000171120 871 ntBASIC8.17□□□□□ -1.1
Trim39Q9ESN2 Gm8046-201ENSMUST00000172151 616 ntBASIC8.17□□□□□ -1.1
Trim39Q9ESN2 Gm21693-201ENSMUST00000178531 1143 ntAPPRIS P1 TSL 5 BASIC8.17□□□□□ -1.1
Trim39Q9ESN2 Gm21677-201ENSMUST00000179508 1143 ntAPPRIS P1 TSL 5 BASIC8.17□□□□□ -1.1
Trim39Q9ESN2 Gm21708-201ENSMUST00000180310 1143 ntAPPRIS P1 TSL 5 BASIC8.17□□□□□ -1.1
Trim39Q9ESN2 4930445N18Rik-201ENSMUST00000180631 886 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
Trim39Q9ESN2 Gm26607-201ENSMUST00000180661 867 ntBASIC8.17□□□□□ -1.1
Trim39Q9ESN2 Gm21045-201ENSMUST00000183058 1020 ntBASIC8.17□□□□□ -1.1
Trim39Q9ESN2 Gm37317-201ENSMUST00000192198 1024 ntBASIC8.17□□□□□ -1.1
Trim39Q9ESN2 Gm37819-201ENSMUST00000194626 1065 ntBASIC8.17□□□□□ -1.1
Trim39Q9ESN2 Rp1-202ENSMUST00000194992 858 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
Trim39Q9ESN2 Gm43390-201ENSMUST00000196614 421 ntBASIC8.17□□□□□ -1.1
Trim39Q9ESN2 Fbxw27-201ENSMUST00000197125 810 ntAPPRIS P2 TSL 3 BASIC8.17□□□□□ -1.1
Trim39Q9ESN2 Gm43599-201ENSMUST00000202680 528 ntTSL 2 BASIC8.17□□□□□ -1.1
Trim39Q9ESN2 Zim2-202ENSMUST00000203572 1158 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
Trim39Q9ESN2 E330011O21Rik-201ENSMUST00000209468 1107 ntTSL 5 BASIC8.17□□□□□ -1.1
Trim39Q9ESN2 Gm45275-201ENSMUST00000210057 365 ntBASIC8.17□□□□□ -1.1
Trim39Q9ESN2 Tubb3-202ENSMUST00000212743 776 ntTSL 3 BASIC8.17□□□□□ -1.1
Trim39Q9ESN2 Pafah1b2-203ENSMUST00000214179 794 ntAPPRIS P1 TSL 2 BASIC8.17□□□□□ -1.1
Trim39Q9ESN2 Gm46103-201ENSMUST00000217614 341 ntBASIC8.17□□□□□ -1.1
Trim39Q9ESN2 Gm8768-201ENSMUST00000220020 826 ntBASIC8.17□□□□□ -1.1
Trim39Q9ESN2 AC125350.3-202ENSMUST00000224295 457 ntBASIC8.17□□□□□ -1.1
Trim39Q9ESN2 AC154184.2-201ENSMUST00000225335 349 ntBASIC8.17□□□□□ -1.1
Trim39Q9ESN2 CT009550.1-201ENSMUST00000225750 864 ntBASIC8.17□□□□□ -1.1
Trim39Q9ESN2 Fabp5-201ENSMUST00000029046 987 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
Trim39Q9ESN2 Cldn10-201ENSMUST00000047761 1148 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
Trim39Q9ESN2 Olfr1444-201ENSMUST00000059675 1129 ntAPPRIS P1 BASIC8.17□□□□□ -1.1
Trim39Q9ESN2 Olfr847-201ENSMUST00000079620 939 ntAPPRIS P1 BASIC8.17□□□□□ -1.1
Trim39Q9ESN2 Plac8l1-201ENSMUST00000081374 763 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
Trim39Q9ESN2 Gm25704-201ENSMUST00000083116 168 ntBASIC8.17□□□□□ -1.1
Trim39Q9ESN2 Sult2a2-201ENSMUST00000086148 741 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
Trim39Q9ESN2 Olfr1256-201ENSMUST00000099763 921 ntAPPRIS P1 BASIC8.17□□□□□ -1.1
Trim39Q9ESN2 Olfr74-201ENSMUST00000099840 957 ntAPPRIS P1 BASIC8.17□□□□□ -1.1
Trim39Q9ESN2 Olfr1085-201ENSMUST00000099879 942 ntAPPRIS P1 BASIC8.17□□□□□ -1.1
Trim39Q9ESN2 Thnsl1-201ENSMUST00000054591 3899 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
Trim39Q9ESN2 Cyhr1-202ENSMUST00000081291 3959 ntAPPRIS P3 TSL 1 (best) BASIC8.17□□□□□ -1.1
Trim39Q9ESN2 Gm44154-201ENSMUST00000204559 2724 ntBASIC8.17□□□□□ -1.1
Trim39Q9ESN2 Hsd11b1-205ENSMUST00000161737 1355 ntAPPRIS P2 TSL 1 (best) BASIC8.17□□□□□ -1.1
Trim39Q9ESN2 Mindy4b-ps-202ENSMUST00000191233 1374 ntAPPRIS P1 TSL 5 BASIC8.17□□□□□ -1.1
Trim39Q9ESN2 AC124426.1-203ENSMUST00000221814 1362 ntBASIC8.17□□□□□ -1.1
Trim39Q9ESN2 Erc1-201ENSMUST00000032279 8356 ntAPPRIS P2 TSL 1 (best) BASIC8.17□□□□□ -1.1
Trim39Q9ESN2 Klrb1b-202ENSMUST00000172887 1416 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
Trim39Q9ESN2 Tmprss11g-201ENSMUST00000134179 2873 ntAPPRIS P2 TSL 1 (best) BASIC8.17□□□□□ -1.1
Trim39Q9ESN2 Olfr510-202ENSMUST00000213979 2898 ntAPPRIS P1 TSL 5 BASIC8.17□□□□□ -1.1
Trim39Q9ESN2 Gm14797-201ENSMUST00000119378 1480 ntBASIC8.17□□□□□ -1.1
Trim39Q9ESN2 Etv1-205ENSMUST00000160856 1474 ntTSL 5 BASIC8.17□□□□□ -1.1
Trim39Q9ESN2 Nlgn3-202ENSMUST00000118111 8004 ntTSL 5 BASIC8.17□□□□□ -1.1
Trim39Q9ESN2 Adhfe1-203ENSMUST00000144177 3239 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
Trim39Q9ESN2 Gm8188-201ENSMUST00000219737 1690 ntBASIC8.17□□□□□ -1.1
Trim39Q9ESN2 Polr2l-201ENSMUST00000043870 1650 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
Retrieved 100 of 76,532 protein–RNA pairs in 49.1 ms