Protein–RNA interactions for Protein: Q9ESN2

Trim39, E3 ubiquitin-protein ligase TRIM39, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39Q9ESN2 Cd2ap-201ENSMUST00000024709 5399 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
Trim39Q9ESN2 Gm3327-201ENSMUST00000168906 1389 ntAPPRIS P1 TSL 5 BASIC8.19□□□□□ -1.1
Trim39Q9ESN2 Gm19938-201ENSMUST00000192692 3259 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
Trim39Q9ESN2 2610042L04Rik-202ENSMUST00000165466 1886 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
Trim39Q9ESN2 Rbm6-ps1-201ENSMUST00000186192 2870 ntBASIC8.19□□□□□ -1.1
Trim39Q9ESN2 Pld1-202ENSMUST00000120834 4849 ntAPPRIS P2 TSL 1 (best) BASIC8.19□□□□□ -1.1
Trim39Q9ESN2 Gfpt2-201ENSMUST00000020629 2947 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
Trim39Q9ESN2 Gm6729-201ENSMUST00000165173 1452 ntBASIC8.19□□□□□ -1.1
Trim39Q9ESN2 Lgals8-207ENSMUST00000143693 2457 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
Trim39Q9ESN2 Slc15a5-206ENSMUST00000171804 2461 ntAPPRIS P1 TSL 5 BASIC8.19□□□□□ -1.1
Trim39Q9ESN2 Ttc21b-201ENSMUST00000102718 4470 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
Trim39Q9ESN2 Gm31898-201ENSMUST00000209232 1540 ntTSL 5 BASIC8.19□□□□□ -1.1
Trim39Q9ESN2 Ccnb1ip1-201ENSMUST00000095932 1509 ntAPPRIS P1 TSL 5 BASIC8.19□□□□□ -1.1
Trim39Q9ESN2 5330413P13Rik-202ENSMUST00000143453 3630 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
Trim39Q9ESN2 Acsbg2-201ENSMUST00000043062 2609 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
Trim39Q9ESN2 Hist2h2be-201ENSMUST00000090781 2620 ntAPPRIS P1 BASIC8.18□□□□□ -1.1
Trim39Q9ESN2 Atg4a-ps-201ENSMUST00000117271 2115 ntAPPRIS P1 BASIC8.18□□□□□ -1.1
Trim39Q9ESN2 Map4k4-213ENSMUST00000193682 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC8.18□□□□□ -1.1
Trim39Q9ESN2 Tmem267-204ENSMUST00000178948 1648 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
Trim39Q9ESN2 Gm43165-201ENSMUST00000200842 1635 ntBASIC8.18□□□□□ -1.1
Trim39Q9ESN2 Tdrd1-201ENSMUST00000078723 4887 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
Trim39Q9ESN2 Etfdh-202ENSMUST00000120992 2233 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
Trim39Q9ESN2 Mak-201ENSMUST00000021792 3385 ntAPPRIS P3 TSL 1 (best) BASIC8.18□□□□□ -1.1
Trim39Q9ESN2 Synj2-208ENSMUST00000115789 5130 ntAPPRIS ALT2 TSL 1 (best) BASIC8.18□□□□□ -1.1
Trim39Q9ESN2 Bivm-202ENSMUST00000114709 3570 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
Trim39Q9ESN2 Acvr1-204ENSMUST00000112601 3050 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
Trim39Q9ESN2 Gm5893-201ENSMUST00000135286 1880 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
Trim39Q9ESN2 Gm26377-201ENSMUST00000102184 108 ntBASIC8.18□□□□□ -1.1
Trim39Q9ESN2 Ifna5-201ENSMUST00000102804 570 ntAPPRIS P1 BASIC8.18□□□□□ -1.1
Trim39Q9ESN2 Igkv3-3-201ENSMUST00000103402 359 ntAPPRIS P1 BASIC8.18□□□□□ -1.1
Trim39Q9ESN2 Igkv3-1-201ENSMUST00000103404 359 ntAPPRIS P1 BASIC8.18□□□□□ -1.1
Trim39Q9ESN2 Gm22546-201ENSMUST00000104351 130 ntBASIC8.18□□□□□ -1.1
Trim39Q9ESN2 S100a16-203ENSMUST00000107331 723 ntAPPRIS P1 TSL 2 BASIC8.18□□□□□ -1.1
Trim39Q9ESN2 Trex1-202ENSMUST00000112053 1054 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
Trim39Q9ESN2 Gm11387-201ENSMUST00000120266 772 ntBASIC8.18□□□□□ -1.1
Trim39Q9ESN2 Gm15368-201ENSMUST00000120438 858 ntBASIC8.18□□□□□ -1.1
Trim39Q9ESN2 Gm12983-201ENSMUST00000120974 310 ntBASIC8.18□□□□□ -1.1
Trim39Q9ESN2 Gm14413-201ENSMUST00000122158 408 ntBASIC8.18□□□□□ -1.1
Trim39Q9ESN2 Plxna4os3-201ENSMUST00000127668 269 ntTSL 3 BASIC8.18□□□□□ -1.1
Trim39Q9ESN2 Gm15555-201ENSMUST00000128832 713 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
Trim39Q9ESN2 Gm14022-201ENSMUST00000143857 691 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
Trim39Q9ESN2 Slc1a3-208ENSMUST00000157065 728 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
Trim39Q9ESN2 Gm25432-201ENSMUST00000158284 66 ntBASIC8.18□□□□□ -1.1
Trim39Q9ESN2 Ifna11-201ENSMUST00000170428 573 ntAPPRIS P1 BASIC8.18□□□□□ -1.1
Trim39Q9ESN2 Gm17169-201ENSMUST00000171382 351 ntBASIC8.18□□□□□ -1.1
Trim39Q9ESN2 Gm9890-201ENSMUST00000171867 537 ntBASIC8.18□□□□□ -1.1
Trim39Q9ESN2 6330403N20Rik-201ENSMUST00000180467 1189 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
Trim39Q9ESN2 Gm6946-201ENSMUST00000182237 987 ntBASIC8.18□□□□□ -1.1
Trim39Q9ESN2 Gm5946-201ENSMUST00000182340 970 ntBASIC8.18□□□□□ -1.1
Trim39Q9ESN2 Pantr1-211ENSMUST00000186656 647 ntTSL 3 BASIC8.18□□□□□ -1.1
Trim39Q9ESN2 Gm8498-201ENSMUST00000188227 974 ntBASIC8.18□□□□□ -1.1
Trim39Q9ESN2 Rbp2-204ENSMUST00000189446 803 ntAPPRIS P1 TSL 3 BASIC8.18□□□□□ -1.1
Trim39Q9ESN2 Oaz3-201ENSMUST00000191506 732 ntAPPRIS P2 TSL 5 BASIC8.18□□□□□ -1.1
Trim39Q9ESN2 Gm37578-201ENSMUST00000192256 1177 ntBASIC8.18□□□□□ -1.1
Trim39Q9ESN2 Gm37920-201ENSMUST00000192952 749 ntBASIC8.18□□□□□ -1.1
Trim39Q9ESN2 Gm38213-201ENSMUST00000193203 173 ntBASIC8.18□□□□□ -1.1
Trim39Q9ESN2 Ndufc1-204ENSMUST00000193279 315 ntAPPRIS P1 TSL 3 BASIC8.18□□□□□ -1.1
Trim39Q9ESN2 Gm31373-201ENSMUST00000194403 737 ntTSL 5 BASIC8.18□□□□□ -1.1
Trim39Q9ESN2 Gm36980-201ENSMUST00000195643 622 ntBASIC8.18□□□□□ -1.1
Trim39Q9ESN2 Gm38184-201ENSMUST00000195757 113 ntBASIC8.18□□□□□ -1.1
Trim39Q9ESN2 Igkv3-6-201ENSMUST00000196007 342 ntBASIC8.18□□□□□ -1.1
Trim39Q9ESN2 4933438B17Rik-201ENSMUST00000196336 1169 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
Trim39Q9ESN2 Crip1-206ENSMUST00000200553 516 ntAPPRIS P1 TSL 2 BASIC8.18□□□□□ -1.1
Trim39Q9ESN2 Gm3176-201ENSMUST00000200920 1249 ntBASIC8.18□□□□□ -1.1
Trim39Q9ESN2 Gm43293-201ENSMUST00000202780 385 ntTSL 3 BASIC8.18□□□□□ -1.1
Trim39Q9ESN2 Gm43442-201ENSMUST00000202865 414 ntBASIC8.18□□□□□ -1.1
Trim39Q9ESN2 Gm45164-201ENSMUST00000207438 896 ntTSL 3 BASIC8.18□□□□□ -1.1
Trim39Q9ESN2 9430099M06Rik-201ENSMUST00000210409 742 ntBASIC8.18□□□□□ -1.1
Trim39Q9ESN2 Mrpl23-207ENSMUST00000210803 590 ntTSL 3 BASIC8.18□□□□□ -1.1
Trim39Q9ESN2 Gm45487-201ENSMUST00000211039 545 ntBASIC8.18□□□□□ -1.1
Trim39Q9ESN2 Gm45676-201ENSMUST00000211306 715 ntTSL 3 BASIC8.18□□□□□ -1.1
Trim39Q9ESN2 Gm9869-202ENSMUST00000214999 679 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
Trim39Q9ESN2 AC157017.2-201ENSMUST00000218354 777 ntBASIC8.18□□□□□ -1.1
Trim39Q9ESN2 Pln-203ENSMUST00000218468 760 ntAPPRIS P1 TSL 5 BASIC8.18□□□□□ -1.1
Trim39Q9ESN2 AC154636.3-201ENSMUST00000221489 1214 ntBASIC8.18□□□□□ -1.1
Trim39Q9ESN2 AC124752.1-201ENSMUST00000222131 776 ntTSL 5 BASIC8.18□□□□□ -1.1
Trim39Q9ESN2 CT030657.4-201ENSMUST00000222177 744 ntBASIC8.18□□□□□ -1.1
Trim39Q9ESN2 CT025538.1-201ENSMUST00000223638 369 ntBASIC8.18□□□□□ -1.1
Trim39Q9ESN2 AC192333.3-201ENSMUST00000224041 463 ntBASIC8.18□□□□□ -1.1
Trim39Q9ESN2 CT009550.5-201ENSMUST00000226286 382 ntBASIC8.18□□□□□ -1.1
Trim39Q9ESN2 Mucl2-202ENSMUST00000226584 823 ntAPPRIS ALT2 BASIC8.18□□□□□ -1.1
Trim39Q9ESN2 AC133156.2-201ENSMUST00000226865 784 ntBASIC8.18□□□□□ -1.1
Trim39Q9ESN2 Tnp1-201ENSMUST00000027374 437 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
Trim39Q9ESN2 Tex29-201ENSMUST00000033909 822 ntAPPRIS P2 TSL 1 (best) BASIC8.18□□□□□ -1.1
Trim39Q9ESN2 Tas2r119-201ENSMUST00000057633 1006 ntAPPRIS P1 BASIC8.18□□□□□ -1.1
Trim39Q9ESN2 Sh2d1a-201ENSMUST00000005839 883 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
Trim39Q9ESN2 Olfr808-201ENSMUST00000060636 939 ntAPPRIS P1 BASIC8.18□□□□□ -1.1
Trim39Q9ESN2 Tas2r102-201ENSMUST00000069268 1044 ntAPPRIS P1 BASIC8.18□□□□□ -1.1
Trim39Q9ESN2 Vmn1r200-201ENSMUST00000074324 1063 ntAPPRIS P2 BASIC8.18□□□□□ -1.1
Trim39Q9ESN2 Olfr826-201ENSMUST00000078322 942 ntAPPRIS P1 BASIC8.18□□□□□ -1.1
Trim39Q9ESN2 Olfr1393-201ENSMUST00000078932 936 ntAPPRIS P1 BASIC8.18□□□□□ -1.1
Trim39Q9ESN2 Olfr132-201ENSMUST00000087128 942 ntAPPRIS P1 BASIC8.18□□□□□ -1.1
Trim39Q9ESN2 Ifna1-201ENSMUST00000094972 570 ntAPPRIS P1 BASIC8.18□□□□□ -1.1
Trim39Q9ESN2 Gm13271-201ENSMUST00000094992 549 ntAPPRIS P1 BASIC8.18□□□□□ -1.1
Trim39Q9ESN2 Olfr954-202ENSMUST00000214818 3299 ntAPPRIS ALT2 TSL 5 BASIC8.18□□□□□ -1.1
Trim39Q9ESN2 Esrrg-201ENSMUST00000027906 5293 ntAPPRIS P3 TSL 1 (best) BASIC8.18□□□□□ -1.1
Trim39Q9ESN2 Gm17259-201ENSMUST00000181520 4608 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
Trim39Q9ESN2 Esp31-201ENSMUST00000174742 1308 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
Trim39Q9ESN2 Gm43609-201ENSMUST00000199084 2712 ntBASIC8.18□□□□□ -1.1
Trim39Q9ESN2 2610203C22Rik-204ENSMUST00000148585 3475 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
Retrieved 100 of 76,532 protein–RNA pairs in 66.9 ms