Protein–RNA interactions for Protein: S4R2K0

Pdf, Peptide deformylase, mousemouse

Predictions only

Length 231 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PdfS4R2K0 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
PdfS4R2K0 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
PdfS4R2K0 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
PdfS4R2K0 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
PdfS4R2K0 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC14.33□□□□□ -0.11
PdfS4R2K0 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.11
PdfS4R2K0 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
PdfS4R2K0 Ddx41-204ENSMUST00000224765 2199 ntBASIC14.33□□□□□ -0.11
PdfS4R2K0 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
PdfS4R2K0 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
PdfS4R2K0 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC14.33□□□□□ -0.12
PdfS4R2K0 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC14.33□□□□□ -0.12
PdfS4R2K0 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
PdfS4R2K0 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
PdfS4R2K0 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
PdfS4R2K0 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
PdfS4R2K0 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC14.33□□□□□ -0.12
PdfS4R2K0 Gm43034-201ENSMUST00000198678 1364 ntBASIC14.33□□□□□ -0.12
PdfS4R2K0 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
PdfS4R2K0 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
PdfS4R2K0 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
PdfS4R2K0 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
PdfS4R2K0 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
PdfS4R2K0 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC14.32□□□□□ -0.12
PdfS4R2K0 Mir6236-201ENSMUST00000184437 123 ntBASIC14.32□□□□□ -0.12
PdfS4R2K0 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC14.32□□□□□ -0.12
PdfS4R2K0 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
PdfS4R2K0 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
PdfS4R2K0 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
PdfS4R2K0 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
PdfS4R2K0 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
PdfS4R2K0 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
PdfS4R2K0 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
PdfS4R2K0 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
PdfS4R2K0 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
PdfS4R2K0 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC14.31□□□□□ -0.12
PdfS4R2K0 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
PdfS4R2K0 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
PdfS4R2K0 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
PdfS4R2K0 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
PdfS4R2K0 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC14.31□□□□□ -0.12
PdfS4R2K0 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
PdfS4R2K0 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC14.31□□□□□ -0.12
PdfS4R2K0 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC14.31□□□□□ -0.12
PdfS4R2K0 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
PdfS4R2K0 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
PdfS4R2K0 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
PdfS4R2K0 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
PdfS4R2K0 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
PdfS4R2K0 Znfx1-201ENSMUST00000048988 7218 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
PdfS4R2K0 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC14.31□□□□□ -0.12
PdfS4R2K0 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
PdfS4R2K0 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
PdfS4R2K0 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
PdfS4R2K0 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
PdfS4R2K0 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
PdfS4R2K0 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
PdfS4R2K0 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
PdfS4R2K0 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
PdfS4R2K0 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
PdfS4R2K0 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
PdfS4R2K0 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
PdfS4R2K0 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC14.3□□□□□ -0.12
PdfS4R2K0 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
PdfS4R2K0 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
PdfS4R2K0 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
PdfS4R2K0 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
PdfS4R2K0 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
PdfS4R2K0 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
PdfS4R2K0 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
PdfS4R2K0 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
PdfS4R2K0 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
PdfS4R2K0 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
PdfS4R2K0 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
PdfS4R2K0 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
PdfS4R2K0 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
PdfS4R2K0 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
PdfS4R2K0 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
PdfS4R2K0 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
PdfS4R2K0 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC14.29□□□□□ -0.12
PdfS4R2K0 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
PdfS4R2K0 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
PdfS4R2K0 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC14.29□□□□□ -0.12
PdfS4R2K0 Gm44832-201ENSMUST00000208849 2303 ntBASIC14.29□□□□□ -0.12
PdfS4R2K0 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
PdfS4R2K0 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
PdfS4R2K0 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
PdfS4R2K0 Gm15039-201ENSMUST00000118914 875 ntBASIC14.29□□□□□ -0.12
PdfS4R2K0 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
PdfS4R2K0 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
PdfS4R2K0 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
PdfS4R2K0 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
PdfS4R2K0 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC14.29□□□□□ -0.12
PdfS4R2K0 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
PdfS4R2K0 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
PdfS4R2K0 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
PdfS4R2K0 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
PdfS4R2K0 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC14.29□□□□□ -0.12
PdfS4R2K0 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC14.28□□□□□ -0.12
PdfS4R2K0 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 31.2 ms