Protein–RNA interactions for Protein: Q9R100

Cdh17, Cadherin-17, mousemouse

Predictions only

Length 827 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh17Q9R100 Gm26833-201ENSMUST00000180899 440 ntBASIC18.28■□□□□ 0.52
Cdh17Q9R100 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC18.28■□□□□ 0.52
Cdh17Q9R100 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC18.28■□□□□ 0.52
Cdh17Q9R100 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
Cdh17Q9R100 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Cdh17Q9R100 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Cdh17Q9R100 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Cdh17Q9R100 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Cdh17Q9R100 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Cdh17Q9R100 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
Cdh17Q9R100 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Cdh17Q9R100 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Cdh17Q9R100 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Cdh17Q9R100 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
Cdh17Q9R100 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
Cdh17Q9R100 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Cdh17Q9R100 Gm45417-201ENSMUST00000209533 758 ntBASIC18.27■□□□□ 0.52
Cdh17Q9R100 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Cdh17Q9R100 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Cdh17Q9R100 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Cdh17Q9R100 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Cdh17Q9R100 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Cdh17Q9R100 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.51
Cdh17Q9R100 Gm43213-201ENSMUST00000151866 1790 ntBASIC18.27■□□□□ 0.51
Cdh17Q9R100 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.51
Cdh17Q9R100 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC18.27■□□□□ 0.51
Cdh17Q9R100 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Cdh17Q9R100 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Cdh17Q9R100 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
Cdh17Q9R100 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Cdh17Q9R100 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC18.26■□□□□ 0.51
Cdh17Q9R100 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Cdh17Q9R100 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Cdh17Q9R100 Gm27032-201ENSMUST00000183124 1116 ntBASIC18.26■□□□□ 0.51
Cdh17Q9R100 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC18.26■□□□□ 0.51
Cdh17Q9R100 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Cdh17Q9R100 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Cdh17Q9R100 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC18.26■□□□□ 0.51
Cdh17Q9R100 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Cdh17Q9R100 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Cdh17Q9R100 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC18.25■□□□□ 0.51
Cdh17Q9R100 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Cdh17Q9R100 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Cdh17Q9R100 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Cdh17Q9R100 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Cdh17Q9R100 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Cdh17Q9R100 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC18.25■□□□□ 0.51
Cdh17Q9R100 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Cdh17Q9R100 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC18.25■□□□□ 0.51
Cdh17Q9R100 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC18.25■□□□□ 0.51
Cdh17Q9R100 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Cdh17Q9R100 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC18.25■□□□□ 0.51
Cdh17Q9R100 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Cdh17Q9R100 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Cdh17Q9R100 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Cdh17Q9R100 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Cdh17Q9R100 Grk6-206ENSMUST00000224995 2971 ntBASIC18.24■□□□□ 0.51
Cdh17Q9R100 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
Cdh17Q9R100 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Cdh17Q9R100 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC18.24■□□□□ 0.51
Cdh17Q9R100 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Cdh17Q9R100 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Cdh17Q9R100 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Cdh17Q9R100 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC18.24■□□□□ 0.51
Cdh17Q9R100 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Cdh17Q9R100 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
Cdh17Q9R100 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Cdh17Q9R100 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
Cdh17Q9R100 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Cdh17Q9R100 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Cdh17Q9R100 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Cdh17Q9R100 Gm43017-201ENSMUST00000198296 752 ntBASIC18.23■□□□□ 0.51
Cdh17Q9R100 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Cdh17Q9R100 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC18.23■□□□□ 0.51
Cdh17Q9R100 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Cdh17Q9R100 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Cdh17Q9R100 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Cdh17Q9R100 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Cdh17Q9R100 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Cdh17Q9R100 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Cdh17Q9R100 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Cdh17Q9R100 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Cdh17Q9R100 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Cdh17Q9R100 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Cdh17Q9R100 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Cdh17Q9R100 Gm14281-201ENSMUST00000121700 1294 ntBASIC18.22■□□□□ 0.51
Cdh17Q9R100 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
Cdh17Q9R100 Gm38205-201ENSMUST00000192243 258 ntBASIC18.22■□□□□ 0.51
Cdh17Q9R100 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Cdh17Q9R100 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Cdh17Q9R100 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Cdh17Q9R100 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Cdh17Q9R100 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Cdh17Q9R100 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Cdh17Q9R100 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Cdh17Q9R100 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
Cdh17Q9R100 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
Cdh17Q9R100 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Cdh17Q9R100 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Cdh17Q9R100 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 61 ms