Protein–RNA interactions for Protein: Q9R0A1

Clcn2, Chloride channel protein 2, mousemouse

Predictions only

Length 908 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn2Q9R0A1 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Clcn2Q9R0A1 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Clcn2Q9R0A1 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Clcn2Q9R0A1 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Clcn2Q9R0A1 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC19.14■□□□□ 0.65
Clcn2Q9R0A1 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Clcn2Q9R0A1 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Clcn2Q9R0A1 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Clcn2Q9R0A1 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Clcn2Q9R0A1 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC19.13■□□□□ 0.65
Clcn2Q9R0A1 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC19.13■□□□□ 0.65
Clcn2Q9R0A1 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Clcn2Q9R0A1 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Clcn2Q9R0A1 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Clcn2Q9R0A1 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
Clcn2Q9R0A1 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
Clcn2Q9R0A1 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Clcn2Q9R0A1 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Clcn2Q9R0A1 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Clcn2Q9R0A1 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
Clcn2Q9R0A1 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Clcn2Q9R0A1 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Clcn2Q9R0A1 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Clcn2Q9R0A1 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Clcn2Q9R0A1 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
Clcn2Q9R0A1 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Clcn2Q9R0A1 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Clcn2Q9R0A1 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Clcn2Q9R0A1 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Clcn2Q9R0A1 Gm11421-201ENSMUST00000122124 294 ntBASIC19.12■□□□□ 0.65
Clcn2Q9R0A1 Gm42911-201ENSMUST00000199360 1630 ntBASIC19.11■□□□□ 0.65
Clcn2Q9R0A1 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Clcn2Q9R0A1 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Clcn2Q9R0A1 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Clcn2Q9R0A1 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Clcn2Q9R0A1 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Clcn2Q9R0A1 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Clcn2Q9R0A1 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC19.11■□□□□ 0.65
Clcn2Q9R0A1 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Clcn2Q9R0A1 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Clcn2Q9R0A1 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Clcn2Q9R0A1 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
Clcn2Q9R0A1 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Clcn2Q9R0A1 Gm45141-201ENSMUST00000206502 1888 ntBASIC19.11■□□□□ 0.65
Clcn2Q9R0A1 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Clcn2Q9R0A1 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
Clcn2Q9R0A1 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
Clcn2Q9R0A1 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Clcn2Q9R0A1 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Clcn2Q9R0A1 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC19.1■□□□□ 0.65
Clcn2Q9R0A1 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
Clcn2Q9R0A1 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC19.1■□□□□ 0.65
Clcn2Q9R0A1 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC19.1■□□□□ 0.65
Clcn2Q9R0A1 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
Clcn2Q9R0A1 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC19.1■□□□□ 0.65
Clcn2Q9R0A1 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Clcn2Q9R0A1 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Clcn2Q9R0A1 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Clcn2Q9R0A1 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC19.09■□□□□ 0.65
Clcn2Q9R0A1 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Clcn2Q9R0A1 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
Clcn2Q9R0A1 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Clcn2Q9R0A1 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Clcn2Q9R0A1 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
Clcn2Q9R0A1 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Clcn2Q9R0A1 Gm18284-201ENSMUST00000172604 624 ntBASIC19.09■□□□□ 0.65
Clcn2Q9R0A1 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
Clcn2Q9R0A1 AC137127.1-201ENSMUST00000213466 1078 ntBASIC19.09■□□□□ 0.65
Clcn2Q9R0A1 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Clcn2Q9R0A1 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Clcn2Q9R0A1 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Clcn2Q9R0A1 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Clcn2Q9R0A1 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Clcn2Q9R0A1 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Clcn2Q9R0A1 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Clcn2Q9R0A1 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Clcn2Q9R0A1 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.65
Clcn2Q9R0A1 Gm42939-201ENSMUST00000197514 2205 ntBASIC19.08■□□□□ 0.65
Clcn2Q9R0A1 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC19.08■□□□□ 0.64
Clcn2Q9R0A1 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC19.08■□□□□ 0.64
Clcn2Q9R0A1 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Clcn2Q9R0A1 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC19.08■□□□□ 0.64
Clcn2Q9R0A1 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Clcn2Q9R0A1 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Clcn2Q9R0A1 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Clcn2Q9R0A1 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
Clcn2Q9R0A1 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Clcn2Q9R0A1 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Clcn2Q9R0A1 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
Clcn2Q9R0A1 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
Clcn2Q9R0A1 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Clcn2Q9R0A1 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC19.07■□□□□ 0.64
Clcn2Q9R0A1 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Clcn2Q9R0A1 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
Clcn2Q9R0A1 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
Clcn2Q9R0A1 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Clcn2Q9R0A1 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Clcn2Q9R0A1 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Clcn2Q9R0A1 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC19.07■□□□□ 0.64
Clcn2Q9R0A1 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Retrieved 100 of 76,532 protein–RNA pairs in 100.5 ms