Protein–RNA interactions for Protein: Q9R061

Nubp2, Cytosolic Fe-S cluster assembly factor NUBP2, mousemouse

Predictions only

Length 275 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nubp2Q9R061 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Nubp2Q9R061 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Nubp2Q9R061 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Nubp2Q9R061 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Nubp2Q9R061 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Nubp2Q9R061 Gm26571-201ENSMUST00000181399 666 ntBASIC16.54■□□□□ 0.24
Nubp2Q9R061 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC16.54■□□□□ 0.24
Nubp2Q9R061 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Nubp2Q9R061 Gm9988-201ENSMUST00000069786 435 ntBASIC16.54■□□□□ 0.24
Nubp2Q9R061 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC16.54■□□□□ 0.24
Nubp2Q9R061 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Nubp2Q9R061 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Nubp2Q9R061 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Nubp2Q9R061 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC16.54■□□□□ 0.24
Nubp2Q9R061 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Nubp2Q9R061 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Nubp2Q9R061 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
Nubp2Q9R061 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Nubp2Q9R061 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Nubp2Q9R061 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
Nubp2Q9R061 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Nubp2Q9R061 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Nubp2Q9R061 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Nubp2Q9R061 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC16.53■□□□□ 0.24
Nubp2Q9R061 Gm7291-201ENSMUST00000199147 382 ntBASIC16.53■□□□□ 0.24
Nubp2Q9R061 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC16.53■□□□□ 0.24
Nubp2Q9R061 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC16.53■□□□□ 0.24
Nubp2Q9R061 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Nubp2Q9R061 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Nubp2Q9R061 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
Nubp2Q9R061 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC16.53■□□□□ 0.24
Nubp2Q9R061 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Nubp2Q9R061 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Nubp2Q9R061 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Nubp2Q9R061 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Nubp2Q9R061 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Nubp2Q9R061 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Nubp2Q9R061 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Nubp2Q9R061 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC16.52■□□□□ 0.24
Nubp2Q9R061 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
Nubp2Q9R061 Gm10849-201ENSMUST00000100397 618 ntBASIC16.52■□□□□ 0.24
Nubp2Q9R061 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC16.52■□□□□ 0.24
Nubp2Q9R061 Gm27405-201ENSMUST00000184201 112 ntBASIC16.52■□□□□ 0.24
Nubp2Q9R061 AC124603.1-201ENSMUST00000223843 308 ntBASIC16.52■□□□□ 0.24
Nubp2Q9R061 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
Nubp2Q9R061 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC16.52■□□□□ 0.24
Nubp2Q9R061 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.23
Nubp2Q9R061 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC16.52■□□□□ 0.23
Nubp2Q9R061 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.23
Nubp2Q9R061 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.23
Nubp2Q9R061 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.23
Nubp2Q9R061 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
Nubp2Q9R061 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Nubp2Q9R061 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
Nubp2Q9R061 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
Nubp2Q9R061 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Nubp2Q9R061 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Nubp2Q9R061 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
Nubp2Q9R061 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Nubp2Q9R061 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC16.51■□□□□ 0.23
Nubp2Q9R061 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
Nubp2Q9R061 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Nubp2Q9R061 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Nubp2Q9R061 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC16.51■□□□□ 0.23
Nubp2Q9R061 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Nubp2Q9R061 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Nubp2Q9R061 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Nubp2Q9R061 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Nubp2Q9R061 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC16.51■□□□□ 0.23
Nubp2Q9R061 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Nubp2Q9R061 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC16.51■□□□□ 0.23
Nubp2Q9R061 Gm10033-202ENSMUST00000211874 928 ntBASIC16.51■□□□□ 0.23
Nubp2Q9R061 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC16.51■□□□□ 0.23
Nubp2Q9R061 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Nubp2Q9R061 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
Nubp2Q9R061 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC16.51■□□□□ 0.23
Nubp2Q9R061 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Nubp2Q9R061 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Nubp2Q9R061 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Nubp2Q9R061 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Nubp2Q9R061 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
Nubp2Q9R061 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Nubp2Q9R061 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Nubp2Q9R061 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Nubp2Q9R061 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Nubp2Q9R061 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
Nubp2Q9R061 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Nubp2Q9R061 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Nubp2Q9R061 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Nubp2Q9R061 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC16.5■□□□□ 0.23
Nubp2Q9R061 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Nubp2Q9R061 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Nubp2Q9R061 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Nubp2Q9R061 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Nubp2Q9R061 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Nubp2Q9R061 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Nubp2Q9R061 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Nubp2Q9R061 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Nubp2Q9R061 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
Nubp2Q9R061 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 16.7 ms