Protein–RNA interactions for Protein: Q9QZR9

Col4a4, Collagen alpha-4(IV) chain, mousemouse

Predictions only

Length 1,682 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a4Q9QZR9 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Col4a4Q9QZR9 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Col4a4Q9QZR9 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
Col4a4Q9QZR9 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
Col4a4Q9QZR9 Gm37292-201ENSMUST00000192062 758 ntBASIC19.11■□□□□ 0.65
Col4a4Q9QZR9 Gm42545-201ENSMUST00000202755 922 ntBASIC19.11■□□□□ 0.65
Col4a4Q9QZR9 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Col4a4Q9QZR9 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC19.11■□□□□ 0.65
Col4a4Q9QZR9 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC19.1■□□□□ 0.65
Col4a4Q9QZR9 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Col4a4Q9QZR9 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Col4a4Q9QZR9 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC19.1■□□□□ 0.65
Col4a4Q9QZR9 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Col4a4Q9QZR9 Gm9103-201ENSMUST00000119371 405 ntBASIC19.1■□□□□ 0.65
Col4a4Q9QZR9 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC19.1■□□□□ 0.65
Col4a4Q9QZR9 AC159205.6-201ENSMUST00000224935 887 ntBASIC19.1■□□□□ 0.65
Col4a4Q9QZR9 Zfp783-201ENSMUST00000095946 670 ntBASIC19.1■□□□□ 0.65
Col4a4Q9QZR9 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Col4a4Q9QZR9 Gm32051-202ENSMUST00000197905 2385 ntBASIC19.1■□□□□ 0.65
Col4a4Q9QZR9 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Col4a4Q9QZR9 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Col4a4Q9QZR9 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Col4a4Q9QZR9 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Col4a4Q9QZR9 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Col4a4Q9QZR9 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC19.09■□□□□ 0.65
Col4a4Q9QZR9 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
Col4a4Q9QZR9 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Col4a4Q9QZR9 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC19.09■□□□□ 0.65
Col4a4Q9QZR9 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
Col4a4Q9QZR9 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.65
Col4a4Q9QZR9 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC19.08■□□□□ 0.65
Col4a4Q9QZR9 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
Col4a4Q9QZR9 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC19.08■□□□□ 0.65
Col4a4Q9QZR9 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Col4a4Q9QZR9 Gm20100-201ENSMUST00000209418 2272 ntBASIC19.08■□□□□ 0.65
Col4a4Q9QZR9 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC19.08■□□□□ 0.64
Col4a4Q9QZR9 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Col4a4Q9QZR9 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Col4a4Q9QZR9 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC19.08■□□□□ 0.64
Col4a4Q9QZR9 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC19.08■□□□□ 0.64
Col4a4Q9QZR9 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Col4a4Q9QZR9 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Col4a4Q9QZR9 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Col4a4Q9QZR9 Gm7712-202ENSMUST00000222331 1510 ntBASIC19.07■□□□□ 0.64
Col4a4Q9QZR9 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
Col4a4Q9QZR9 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Col4a4Q9QZR9 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Col4a4Q9QZR9 AC107452.1-201ENSMUST00000227963 481 ntBASIC19.07■□□□□ 0.64
Col4a4Q9QZR9 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Col4a4Q9QZR9 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Col4a4Q9QZR9 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Col4a4Q9QZR9 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC19.06■□□□□ 0.64
Col4a4Q9QZR9 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Col4a4Q9QZR9 Ank2-226ENSMUST00000189368 339 ntBASIC19.06■□□□□ 0.64
Col4a4Q9QZR9 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC19.06■□□□□ 0.64
Col4a4Q9QZR9 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Col4a4Q9QZR9 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Col4a4Q9QZR9 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
Col4a4Q9QZR9 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Col4a4Q9QZR9 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Col4a4Q9QZR9 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Col4a4Q9QZR9 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Col4a4Q9QZR9 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Col4a4Q9QZR9 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Col4a4Q9QZR9 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
Col4a4Q9QZR9 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC19.05■□□□□ 0.64
Col4a4Q9QZR9 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Col4a4Q9QZR9 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Col4a4Q9QZR9 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Col4a4Q9QZR9 AC124581.1-201ENSMUST00000225416 1399 ntBASIC19.05■□□□□ 0.64
Col4a4Q9QZR9 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC19.05■□□□□ 0.64
Col4a4Q9QZR9 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Col4a4Q9QZR9 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Col4a4Q9QZR9 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Col4a4Q9QZR9 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC19.05■□□□□ 0.64
Col4a4Q9QZR9 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Col4a4Q9QZR9 Gm10138-203ENSMUST00000206952 366 ntBASIC19.05■□□□□ 0.64
Col4a4Q9QZR9 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Col4a4Q9QZR9 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Col4a4Q9QZR9 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Col4a4Q9QZR9 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Col4a4Q9QZR9 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Col4a4Q9QZR9 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Col4a4Q9QZR9 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
Col4a4Q9QZR9 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Col4a4Q9QZR9 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Col4a4Q9QZR9 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Col4a4Q9QZR9 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
Col4a4Q9QZR9 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Col4a4Q9QZR9 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Col4a4Q9QZR9 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Col4a4Q9QZR9 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Col4a4Q9QZR9 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Col4a4Q9QZR9 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Col4a4Q9QZR9 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Col4a4Q9QZR9 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Col4a4Q9QZR9 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Col4a4Q9QZR9 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Col4a4Q9QZR9 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC19.03■□□□□ 0.64
Col4a4Q9QZR9 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Retrieved 100 of 76,532 protein–RNA pairs in 21.4 ms