Protein–RNA interactions for Protein: Q9QXN0

Shroom3, Protein Shroom3, mousemouse

Predictions only

Length 1,986 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shroom3Q9QXN0 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Shroom3Q9QXN0 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Shroom3Q9QXN0 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Shroom3Q9QXN0 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Shroom3Q9QXN0 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Shroom3Q9QXN0 Gm38342-201ENSMUST00000195710 2980 ntBASIC18.85■□□□□ 0.61
Shroom3Q9QXN0 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Shroom3Q9QXN0 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Shroom3Q9QXN0 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Shroom3Q9QXN0 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Shroom3Q9QXN0 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Shroom3Q9QXN0 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC18.84■□□□□ 0.61
Shroom3Q9QXN0 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Shroom3Q9QXN0 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Shroom3Q9QXN0 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Shroom3Q9QXN0 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Shroom3Q9QXN0 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Shroom3Q9QXN0 Gm42555-201ENSMUST00000199304 1039 ntBASIC18.84■□□□□ 0.61
Shroom3Q9QXN0 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC18.84■□□□□ 0.61
Shroom3Q9QXN0 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
Shroom3Q9QXN0 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Shroom3Q9QXN0 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Shroom3Q9QXN0 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Shroom3Q9QXN0 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Shroom3Q9QXN0 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
Shroom3Q9QXN0 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Shroom3Q9QXN0 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Shroom3Q9QXN0 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Shroom3Q9QXN0 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Shroom3Q9QXN0 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC18.83■□□□□ 0.61
Shroom3Q9QXN0 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Shroom3Q9QXN0 Gm27032-201ENSMUST00000183124 1116 ntBASIC18.83■□□□□ 0.61
Shroom3Q9QXN0 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC18.83■□□□□ 0.61
Shroom3Q9QXN0 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Shroom3Q9QXN0 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Shroom3Q9QXN0 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Shroom3Q9QXN0 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
Shroom3Q9QXN0 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Shroom3Q9QXN0 Gm10167-201ENSMUST00000150411 1479 ntBASIC18.83■□□□□ 0.6
Shroom3Q9QXN0 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Shroom3Q9QXN0 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
Shroom3Q9QXN0 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Shroom3Q9QXN0 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Shroom3Q9QXN0 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
Shroom3Q9QXN0 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
Shroom3Q9QXN0 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Shroom3Q9QXN0 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Shroom3Q9QXN0 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Shroom3Q9QXN0 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Shroom3Q9QXN0 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC18.82■□□□□ 0.6
Shroom3Q9QXN0 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Shroom3Q9QXN0 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC18.82■□□□□ 0.6
Shroom3Q9QXN0 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Shroom3Q9QXN0 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
Shroom3Q9QXN0 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Shroom3Q9QXN0 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Shroom3Q9QXN0 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC18.81■□□□□ 0.6
Shroom3Q9QXN0 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC18.81■□□□□ 0.6
Shroom3Q9QXN0 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Shroom3Q9QXN0 Gm26971-201ENSMUST00000182423 1072 ntBASIC18.81■□□□□ 0.6
Shroom3Q9QXN0 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Shroom3Q9QXN0 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Shroom3Q9QXN0 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Shroom3Q9QXN0 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Shroom3Q9QXN0 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC18.81■□□□□ 0.6
Shroom3Q9QXN0 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Shroom3Q9QXN0 Gm5112-201ENSMUST00000204407 2368 ntBASIC18.81■□□□□ 0.6
Shroom3Q9QXN0 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Shroom3Q9QXN0 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Shroom3Q9QXN0 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Shroom3Q9QXN0 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
Shroom3Q9QXN0 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Shroom3Q9QXN0 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
Shroom3Q9QXN0 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Shroom3Q9QXN0 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Shroom3Q9QXN0 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
Shroom3Q9QXN0 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Shroom3Q9QXN0 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Shroom3Q9QXN0 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC18.8■□□□□ 0.6
Shroom3Q9QXN0 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Shroom3Q9QXN0 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
Shroom3Q9QXN0 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Shroom3Q9QXN0 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Shroom3Q9QXN0 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Shroom3Q9QXN0 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
Shroom3Q9QXN0 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC18.8■□□□□ 0.6
Shroom3Q9QXN0 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Shroom3Q9QXN0 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Shroom3Q9QXN0 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Shroom3Q9QXN0 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Shroom3Q9QXN0 Gm9885-202ENSMUST00000186234 2209 ntBASIC18.79■□□□□ 0.6
Shroom3Q9QXN0 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Shroom3Q9QXN0 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Shroom3Q9QXN0 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Shroom3Q9QXN0 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
Shroom3Q9QXN0 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Shroom3Q9QXN0 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Shroom3Q9QXN0 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Shroom3Q9QXN0 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Shroom3Q9QXN0 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 21 ms