Protein–RNA interactions for Protein: Q9JM99

Prg4, Proteoglycan 4, mousemouse

Predictions only

Length 1,054 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prg4Q9JM99 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC17.09■□□□□ 0.33
Prg4Q9JM99 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Prg4Q9JM99 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC17.09■□□□□ 0.33
Prg4Q9JM99 Gm5408-201ENSMUST00000197998 747 ntBASIC17.09■□□□□ 0.33
Prg4Q9JM99 CT025689.6-201ENSMUST00000224991 1104 ntBASIC17.09■□□□□ 0.33
Prg4Q9JM99 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Prg4Q9JM99 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Prg4Q9JM99 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Prg4Q9JM99 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Prg4Q9JM99 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
Prg4Q9JM99 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Prg4Q9JM99 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Prg4Q9JM99 Gm43672-201ENSMUST00000199072 1731 ntBASIC17.09■□□□□ 0.33
Prg4Q9JM99 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Prg4Q9JM99 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Prg4Q9JM99 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC17.09■□□□□ 0.33
Prg4Q9JM99 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC17.08■□□□□ 0.33
Prg4Q9JM99 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Prg4Q9JM99 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Prg4Q9JM99 Gm10616-201ENSMUST00000205285 2127 ntBASIC17.08■□□□□ 0.33
Prg4Q9JM99 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Prg4Q9JM99 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Prg4Q9JM99 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Prg4Q9JM99 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
Prg4Q9JM99 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Prg4Q9JM99 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Prg4Q9JM99 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Prg4Q9JM99 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Prg4Q9JM99 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC17.08■□□□□ 0.32
Prg4Q9JM99 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
Prg4Q9JM99 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC17.08■□□□□ 0.32
Prg4Q9JM99 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC17.08■□□□□ 0.32
Prg4Q9JM99 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Prg4Q9JM99 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
Prg4Q9JM99 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
Prg4Q9JM99 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC17.08■□□□□ 0.32
Prg4Q9JM99 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Prg4Q9JM99 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Prg4Q9JM99 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Prg4Q9JM99 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Prg4Q9JM99 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC17.08■□□□□ 0.32
Prg4Q9JM99 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
Prg4Q9JM99 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Prg4Q9JM99 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC17.07■□□□□ 0.32
Prg4Q9JM99 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Prg4Q9JM99 Gm8309-201ENSMUST00000206627 1448 ntBASIC17.07■□□□□ 0.32
Prg4Q9JM99 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Prg4Q9JM99 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
Prg4Q9JM99 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Prg4Q9JM99 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC17.07■□□□□ 0.32
Prg4Q9JM99 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Prg4Q9JM99 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC17.07■□□□□ 0.32
Prg4Q9JM99 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
Prg4Q9JM99 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Prg4Q9JM99 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Prg4Q9JM99 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
Prg4Q9JM99 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
Prg4Q9JM99 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Prg4Q9JM99 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC17.07■□□□□ 0.32
Prg4Q9JM99 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Prg4Q9JM99 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
Prg4Q9JM99 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Prg4Q9JM99 Gm43859-201ENSMUST00000200075 1412 ntBASIC17.06■□□□□ 0.32
Prg4Q9JM99 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Prg4Q9JM99 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC17.06■□□□□ 0.32
Prg4Q9JM99 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Prg4Q9JM99 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC17.06■□□□□ 0.32
Prg4Q9JM99 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Prg4Q9JM99 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
Prg4Q9JM99 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Prg4Q9JM99 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC17.06■□□□□ 0.32
Prg4Q9JM99 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Prg4Q9JM99 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Prg4Q9JM99 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC17.05■□□□□ 0.32
Prg4Q9JM99 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Prg4Q9JM99 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Prg4Q9JM99 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Prg4Q9JM99 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
Prg4Q9JM99 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Prg4Q9JM99 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC17.05■□□□□ 0.32
Prg4Q9JM99 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC17.05■□□□□ 0.32
Prg4Q9JM99 Gm5297-201ENSMUST00000198555 1171 ntBASIC17.05■□□□□ 0.32
Prg4Q9JM99 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC17.05■□□□□ 0.32
Prg4Q9JM99 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
Prg4Q9JM99 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Prg4Q9JM99 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
Prg4Q9JM99 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Prg4Q9JM99 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
Prg4Q9JM99 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Prg4Q9JM99 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Prg4Q9JM99 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Prg4Q9JM99 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Prg4Q9JM99 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Prg4Q9JM99 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Prg4Q9JM99 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Prg4Q9JM99 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Prg4Q9JM99 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Prg4Q9JM99 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Prg4Q9JM99 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Prg4Q9JM99 Iqck-206ENSMUST00000208658 2891 ntBASIC17.03■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 20.1 ms