Protein–RNA interactions for Protein: Q9JJR9

Nrip3, Nuclear receptor-interacting protein 3, mousemouse

Predictions only

Length 240 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nrip3Q9JJR9 Gm44832-201ENSMUST00000208849 2303 ntBASIC16.96■□□□□ 0.3
Nrip3Q9JJR9 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Nrip3Q9JJR9 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
Nrip3Q9JJR9 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Nrip3Q9JJR9 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Nrip3Q9JJR9 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Nrip3Q9JJR9 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC16.95■□□□□ 0.3
Nrip3Q9JJR9 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC16.95■□□□□ 0.3
Nrip3Q9JJR9 Gm9207-201ENSMUST00000198773 1115 ntBASIC16.95■□□□□ 0.3
Nrip3Q9JJR9 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Nrip3Q9JJR9 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC16.95■□□□□ 0.3
Nrip3Q9JJR9 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Nrip3Q9JJR9 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Nrip3Q9JJR9 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Nrip3Q9JJR9 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Nrip3Q9JJR9 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Nrip3Q9JJR9 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Nrip3Q9JJR9 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC16.95■□□□□ 0.3
Nrip3Q9JJR9 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Nrip3Q9JJR9 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Nrip3Q9JJR9 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Nrip3Q9JJR9 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Nrip3Q9JJR9 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Nrip3Q9JJR9 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Nrip3Q9JJR9 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Nrip3Q9JJR9 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Nrip3Q9JJR9 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC16.94■□□□□ 0.3
Nrip3Q9JJR9 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Nrip3Q9JJR9 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Nrip3Q9JJR9 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC16.94■□□□□ 0.3
Nrip3Q9JJR9 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC16.94■□□□□ 0.3
Nrip3Q9JJR9 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Nrip3Q9JJR9 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Nrip3Q9JJR9 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Nrip3Q9JJR9 Gm43213-201ENSMUST00000151866 1790 ntBASIC16.94■□□□□ 0.3
Nrip3Q9JJR9 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Nrip3Q9JJR9 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Nrip3Q9JJR9 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
Nrip3Q9JJR9 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
Nrip3Q9JJR9 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Nrip3Q9JJR9 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Nrip3Q9JJR9 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
Nrip3Q9JJR9 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC16.94■□□□□ 0.3
Nrip3Q9JJR9 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC16.94■□□□□ 0.3
Nrip3Q9JJR9 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC16.93■□□□□ 0.3
Nrip3Q9JJR9 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Nrip3Q9JJR9 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Nrip3Q9JJR9 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
Nrip3Q9JJR9 Gm12922-201ENSMUST00000120626 809 ntBASIC16.93■□□□□ 0.3
Nrip3Q9JJR9 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Nrip3Q9JJR9 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Nrip3Q9JJR9 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Nrip3Q9JJR9 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Nrip3Q9JJR9 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Nrip3Q9JJR9 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
Nrip3Q9JJR9 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC16.92■□□□□ 0.3
Nrip3Q9JJR9 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Nrip3Q9JJR9 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Nrip3Q9JJR9 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC16.92■□□□□ 0.3
Nrip3Q9JJR9 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Nrip3Q9JJR9 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
Nrip3Q9JJR9 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC16.92■□□□□ 0.3
Nrip3Q9JJR9 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Nrip3Q9JJR9 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Nrip3Q9JJR9 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
Nrip3Q9JJR9 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Nrip3Q9JJR9 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Nrip3Q9JJR9 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC16.92■□□□□ 0.3
Nrip3Q9JJR9 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Nrip3Q9JJR9 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Nrip3Q9JJR9 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Nrip3Q9JJR9 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Nrip3Q9JJR9 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Nrip3Q9JJR9 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC16.91■□□□□ 0.3
Nrip3Q9JJR9 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC16.91■□□□□ 0.3
Nrip3Q9JJR9 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Nrip3Q9JJR9 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Nrip3Q9JJR9 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
Nrip3Q9JJR9 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Nrip3Q9JJR9 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Nrip3Q9JJR9 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
Nrip3Q9JJR9 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
Nrip3Q9JJR9 Dmtn-207ENSMUST00000228001 2437 ntBASIC16.9■□□□□ 0.3
Nrip3Q9JJR9 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Nrip3Q9JJR9 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Nrip3Q9JJR9 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Nrip3Q9JJR9 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Nrip3Q9JJR9 Gm5576-201ENSMUST00000075809 1236 ntBASIC16.9■□□□□ 0.3
Nrip3Q9JJR9 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
Nrip3Q9JJR9 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC16.9■□□□□ 0.3
Nrip3Q9JJR9 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
Nrip3Q9JJR9 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Nrip3Q9JJR9 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
Nrip3Q9JJR9 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Nrip3Q9JJR9 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
Nrip3Q9JJR9 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
Nrip3Q9JJR9 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
Nrip3Q9JJR9 Gm45606-201ENSMUST00000209836 2795 ntBASIC16.89■□□□□ 0.3
Nrip3Q9JJR9 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Nrip3Q9JJR9 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 19.9 ms