Protein–RNA interactions for Protein: Q9ERD7

Tubb3, Tubulin beta-3 chain, mousemouse

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tubb3Q9ERD7 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Tubb3Q9ERD7 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Tubb3Q9ERD7 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Tubb3Q9ERD7 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC18.62■□□□□ 0.57
Tubb3Q9ERD7 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Tubb3Q9ERD7 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC18.62■□□□□ 0.57
Tubb3Q9ERD7 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Tubb3Q9ERD7 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Tubb3Q9ERD7 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
Tubb3Q9ERD7 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Tubb3Q9ERD7 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Tubb3Q9ERD7 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Tubb3Q9ERD7 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Tubb3Q9ERD7 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Tubb3Q9ERD7 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Tubb3Q9ERD7 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Tubb3Q9ERD7 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC18.61■□□□□ 0.57
Tubb3Q9ERD7 Gm44832-201ENSMUST00000208849 2303 ntBASIC18.61■□□□□ 0.57
Tubb3Q9ERD7 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Tubb3Q9ERD7 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Tubb3Q9ERD7 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Tubb3Q9ERD7 Gm7291-201ENSMUST00000199147 382 ntBASIC18.61■□□□□ 0.57
Tubb3Q9ERD7 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Tubb3Q9ERD7 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Tubb3Q9ERD7 Gm42939-201ENSMUST00000197514 2205 ntBASIC18.61■□□□□ 0.57
Tubb3Q9ERD7 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Tubb3Q9ERD7 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Tubb3Q9ERD7 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Tubb3Q9ERD7 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Tubb3Q9ERD7 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Tubb3Q9ERD7 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC18.6■□□□□ 0.57
Tubb3Q9ERD7 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC18.6■□□□□ 0.57
Tubb3Q9ERD7 Gm42778-201ENSMUST00000199644 553 ntBASIC18.6■□□□□ 0.57
Tubb3Q9ERD7 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Tubb3Q9ERD7 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Tubb3Q9ERD7 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Tubb3Q9ERD7 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Tubb3Q9ERD7 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
Tubb3Q9ERD7 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
Tubb3Q9ERD7 Gm10571-201ENSMUST00000097869 1638 ntBASIC18.6■□□□□ 0.57
Tubb3Q9ERD7 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Tubb3Q9ERD7 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Tubb3Q9ERD7 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Tubb3Q9ERD7 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
Tubb3Q9ERD7 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Tubb3Q9ERD7 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC18.59■□□□□ 0.57
Tubb3Q9ERD7 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Tubb3Q9ERD7 Gm5297-201ENSMUST00000198555 1171 ntBASIC18.59■□□□□ 0.57
Tubb3Q9ERD7 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Tubb3Q9ERD7 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
Tubb3Q9ERD7 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
Tubb3Q9ERD7 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
Tubb3Q9ERD7 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
Tubb3Q9ERD7 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.57
Tubb3Q9ERD7 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
Tubb3Q9ERD7 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
Tubb3Q9ERD7 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC18.58■□□□□ 0.56
Tubb3Q9ERD7 Gm27405-201ENSMUST00000184201 112 ntBASIC18.58■□□□□ 0.56
Tubb3Q9ERD7 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC18.58■□□□□ 0.56
Tubb3Q9ERD7 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC18.58■□□□□ 0.56
Tubb3Q9ERD7 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Tubb3Q9ERD7 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC18.58■□□□□ 0.56
Tubb3Q9ERD7 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Tubb3Q9ERD7 Gm45141-201ENSMUST00000206502 1888 ntBASIC18.58■□□□□ 0.56
Tubb3Q9ERD7 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Tubb3Q9ERD7 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
Tubb3Q9ERD7 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Tubb3Q9ERD7 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
Tubb3Q9ERD7 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
Tubb3Q9ERD7 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Tubb3Q9ERD7 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Tubb3Q9ERD7 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
Tubb3Q9ERD7 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Tubb3Q9ERD7 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Tubb3Q9ERD7 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC18.57■□□□□ 0.56
Tubb3Q9ERD7 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Tubb3Q9ERD7 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Tubb3Q9ERD7 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Tubb3Q9ERD7 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
Tubb3Q9ERD7 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
Tubb3Q9ERD7 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
Tubb3Q9ERD7 Gm15853-202ENSMUST00000195518 2041 ntBASIC18.57■□□□□ 0.56
Tubb3Q9ERD7 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
Tubb3Q9ERD7 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Tubb3Q9ERD7 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
Tubb3Q9ERD7 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
Tubb3Q9ERD7 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Tubb3Q9ERD7 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
Tubb3Q9ERD7 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Tubb3Q9ERD7 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC18.56■□□□□ 0.56
Tubb3Q9ERD7 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Tubb3Q9ERD7 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Tubb3Q9ERD7 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Tubb3Q9ERD7 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
Tubb3Q9ERD7 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Tubb3Q9ERD7 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Tubb3Q9ERD7 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC18.55■□□□□ 0.56
Tubb3Q9ERD7 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Tubb3Q9ERD7 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Tubb3Q9ERD7 Gm10849-201ENSMUST00000100397 618 ntBASIC18.55■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 22.8 ms