Protein–RNA interactions for Protein: Q9ER99

Rsc1a1, Regulatory solute carrier protein family 1 member 1, mousemouse

Predictions only

Length 582 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rsc1a1Q9ER99 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Rsc1a1Q9ER99 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Rsc1a1Q9ER99 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC18.4■□□□□ 0.54
Rsc1a1Q9ER99 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC18.4■□□□□ 0.54
Rsc1a1Q9ER99 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Rsc1a1Q9ER99 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Rsc1a1Q9ER99 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
Rsc1a1Q9ER99 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Rsc1a1Q9ER99 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Rsc1a1Q9ER99 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC18.4■□□□□ 0.54
Rsc1a1Q9ER99 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Rsc1a1Q9ER99 Zcchc6-207ENSMUST00000225576 2499 ntBASIC18.4■□□□□ 0.54
Rsc1a1Q9ER99 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Rsc1a1Q9ER99 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Rsc1a1Q9ER99 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
Rsc1a1Q9ER99 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Rsc1a1Q9ER99 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Rsc1a1Q9ER99 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Rsc1a1Q9ER99 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Rsc1a1Q9ER99 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC18.39■□□□□ 0.53
Rsc1a1Q9ER99 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC18.39■□□□□ 0.53
Rsc1a1Q9ER99 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Rsc1a1Q9ER99 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Rsc1a1Q9ER99 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC18.39■□□□□ 0.53
Rsc1a1Q9ER99 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Rsc1a1Q9ER99 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Rsc1a1Q9ER99 Fcho2-208ENSMUST00000224992 2964 ntBASIC18.39■□□□□ 0.53
Rsc1a1Q9ER99 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Rsc1a1Q9ER99 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
Rsc1a1Q9ER99 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC18.38■□□□□ 0.53
Rsc1a1Q9ER99 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC18.38■□□□□ 0.53
Rsc1a1Q9ER99 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC18.38■□□□□ 0.53
Rsc1a1Q9ER99 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Rsc1a1Q9ER99 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Rsc1a1Q9ER99 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Rsc1a1Q9ER99 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Rsc1a1Q9ER99 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Rsc1a1Q9ER99 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
Rsc1a1Q9ER99 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Rsc1a1Q9ER99 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC18.37■□□□□ 0.53
Rsc1a1Q9ER99 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Rsc1a1Q9ER99 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Rsc1a1Q9ER99 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Rsc1a1Q9ER99 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC18.37■□□□□ 0.53
Rsc1a1Q9ER99 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC18.37■□□□□ 0.53
Rsc1a1Q9ER99 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Rsc1a1Q9ER99 Gm15635-204ENSMUST00000208024 2539 ntBASIC18.37■□□□□ 0.53
Rsc1a1Q9ER99 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Rsc1a1Q9ER99 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC18.36■□□□□ 0.53
Rsc1a1Q9ER99 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Rsc1a1Q9ER99 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC18.36■□□□□ 0.53
Rsc1a1Q9ER99 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Rsc1a1Q9ER99 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Rsc1a1Q9ER99 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC18.36■□□□□ 0.53
Rsc1a1Q9ER99 Ddx41-204ENSMUST00000224765 2199 ntBASIC18.36■□□□□ 0.53
Rsc1a1Q9ER99 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Rsc1a1Q9ER99 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
Rsc1a1Q9ER99 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Rsc1a1Q9ER99 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Rsc1a1Q9ER99 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Rsc1a1Q9ER99 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC18.35■□□□□ 0.53
Rsc1a1Q9ER99 Gm45906-201ENSMUST00000208911 1430 ntBASIC18.35■□□□□ 0.53
Rsc1a1Q9ER99 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Rsc1a1Q9ER99 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
Rsc1a1Q9ER99 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Rsc1a1Q9ER99 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Rsc1a1Q9ER99 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Rsc1a1Q9ER99 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Rsc1a1Q9ER99 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC18.35■□□□□ 0.53
Rsc1a1Q9ER99 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Rsc1a1Q9ER99 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Rsc1a1Q9ER99 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Rsc1a1Q9ER99 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Rsc1a1Q9ER99 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Rsc1a1Q9ER99 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Rsc1a1Q9ER99 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Rsc1a1Q9ER99 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Rsc1a1Q9ER99 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
Rsc1a1Q9ER99 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Rsc1a1Q9ER99 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Rsc1a1Q9ER99 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC18.34■□□□□ 0.53
Rsc1a1Q9ER99 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Rsc1a1Q9ER99 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Rsc1a1Q9ER99 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Rsc1a1Q9ER99 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Rsc1a1Q9ER99 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Rsc1a1Q9ER99 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Rsc1a1Q9ER99 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Rsc1a1Q9ER99 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Rsc1a1Q9ER99 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Rsc1a1Q9ER99 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Rsc1a1Q9ER99 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Rsc1a1Q9ER99 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Rsc1a1Q9ER99 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC18.33■□□□□ 0.53
Rsc1a1Q9ER99 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Rsc1a1Q9ER99 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC18.33■□□□□ 0.53
Rsc1a1Q9ER99 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Rsc1a1Q9ER99 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Rsc1a1Q9ER99 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Rsc1a1Q9ER99 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC18.33■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 16.5 ms