Protein–RNA interactions for Protein: Q9DB85

Rrp8, Ribosomal RNA-processing protein 8, mousemouse

Known RBP Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rrp8Q9DB85 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Rrp8Q9DB85 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
Rrp8Q9DB85 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Rrp8Q9DB85 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Rrp8Q9DB85 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Rrp8Q9DB85 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Rrp8Q9DB85 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Rrp8Q9DB85 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC18.37■□□□□ 0.53
Rrp8Q9DB85 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
Rrp8Q9DB85 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC18.37■□□□□ 0.53
Rrp8Q9DB85 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Rrp8Q9DB85 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
Rrp8Q9DB85 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Rrp8Q9DB85 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
Rrp8Q9DB85 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Rrp8Q9DB85 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC18.36■□□□□ 0.53
Rrp8Q9DB85 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Rrp8Q9DB85 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Rrp8Q9DB85 Gm2399-201ENSMUST00000104944 225 ntBASIC18.36■□□□□ 0.53
Rrp8Q9DB85 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC18.36■□□□□ 0.53
Rrp8Q9DB85 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
Rrp8Q9DB85 Gm19094-201ENSMUST00000209791 1246 ntBASIC18.36■□□□□ 0.53
Rrp8Q9DB85 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Rrp8Q9DB85 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC18.36■□□□□ 0.53
Rrp8Q9DB85 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC18.36■□□□□ 0.53
Rrp8Q9DB85 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Rrp8Q9DB85 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Rrp8Q9DB85 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC18.36■□□□□ 0.53
Rrp8Q9DB85 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Rrp8Q9DB85 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Rrp8Q9DB85 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Rrp8Q9DB85 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
Rrp8Q9DB85 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
Rrp8Q9DB85 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Rrp8Q9DB85 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Rrp8Q9DB85 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC18.35■□□□□ 0.53
Rrp8Q9DB85 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Rrp8Q9DB85 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Rrp8Q9DB85 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
Rrp8Q9DB85 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Rrp8Q9DB85 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Rrp8Q9DB85 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Rrp8Q9DB85 Gm15378-201ENSMUST00000121894 207 ntBASIC18.34■□□□□ 0.53
Rrp8Q9DB85 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Rrp8Q9DB85 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC18.34■□□□□ 0.53
Rrp8Q9DB85 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
Rrp8Q9DB85 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Rrp8Q9DB85 AC160393.1-201ENSMUST00000218378 1279 ntBASIC18.34■□□□□ 0.53
Rrp8Q9DB85 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Rrp8Q9DB85 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Rrp8Q9DB85 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Rrp8Q9DB85 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Rrp8Q9DB85 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Rrp8Q9DB85 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
Rrp8Q9DB85 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
Rrp8Q9DB85 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Rrp8Q9DB85 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC18.33■□□□□ 0.53
Rrp8Q9DB85 Notumos-201ENSMUST00000151998 2659 ntBASIC18.33■□□□□ 0.53
Rrp8Q9DB85 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC18.33■□□□□ 0.52
Rrp8Q9DB85 Gm715-201ENSMUST00000117865 831 ntBASIC18.33■□□□□ 0.52
Rrp8Q9DB85 Gm15847-201ENSMUST00000121417 1065 ntBASIC18.33■□□□□ 0.52
Rrp8Q9DB85 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC18.33■□□□□ 0.52
Rrp8Q9DB85 AL672049.1-201ENSMUST00000197943 91 ntBASIC18.33■□□□□ 0.52
Rrp8Q9DB85 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC18.33■□□□□ 0.52
Rrp8Q9DB85 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Rrp8Q9DB85 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Rrp8Q9DB85 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Rrp8Q9DB85 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Rrp8Q9DB85 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Rrp8Q9DB85 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC18.32■□□□□ 0.52
Rrp8Q9DB85 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Rrp8Q9DB85 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Rrp8Q9DB85 Gm43672-201ENSMUST00000199072 1731 ntBASIC18.32■□□□□ 0.52
Rrp8Q9DB85 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Rrp8Q9DB85 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Rrp8Q9DB85 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Rrp8Q9DB85 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Rrp8Q9DB85 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
Rrp8Q9DB85 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
Rrp8Q9DB85 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Rrp8Q9DB85 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
Rrp8Q9DB85 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Rrp8Q9DB85 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Rrp8Q9DB85 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Rrp8Q9DB85 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC18.31■□□□□ 0.52
Rrp8Q9DB85 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
Rrp8Q9DB85 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Rrp8Q9DB85 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
Rrp8Q9DB85 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Rrp8Q9DB85 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Rrp8Q9DB85 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Rrp8Q9DB85 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Rrp8Q9DB85 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
Rrp8Q9DB85 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Rrp8Q9DB85 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Rrp8Q9DB85 Gm10698-201ENSMUST00000182663 604 ntBASIC18.3■□□□□ 0.52
Rrp8Q9DB85 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
Rrp8Q9DB85 AC153881.1-201ENSMUST00000214448 284 ntBASIC18.3■□□□□ 0.52
Rrp8Q9DB85 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
Rrp8Q9DB85 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 35.4 ms