Protein–RNA interactions for Protein: Q9D6Z1

Nop56, Nucleolar protein 56, mousemouse

Known RBP Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nop56Q9D6Z1 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
Nop56Q9D6Z1 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Nop56Q9D6Z1 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Nop56Q9D6Z1 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Nop56Q9D6Z1 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Nop56Q9D6Z1 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Nop56Q9D6Z1 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
Nop56Q9D6Z1 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.69
Nop56Q9D6Z1 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Nop56Q9D6Z1 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
Nop56Q9D6Z1 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Nop56Q9D6Z1 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Nop56Q9D6Z1 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
Nop56Q9D6Z1 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Nop56Q9D6Z1 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Nop56Q9D6Z1 Gm42911-201ENSMUST00000199360 1630 ntBASIC19.33■□□□□ 0.68
Nop56Q9D6Z1 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC19.33■□□□□ 0.68
Nop56Q9D6Z1 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC19.32■□□□□ 0.68
Nop56Q9D6Z1 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
Nop56Q9D6Z1 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Nop56Q9D6Z1 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC19.32■□□□□ 0.68
Nop56Q9D6Z1 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Nop56Q9D6Z1 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC19.32■□□□□ 0.68
Nop56Q9D6Z1 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC19.32■□□□□ 0.68
Nop56Q9D6Z1 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Nop56Q9D6Z1 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Nop56Q9D6Z1 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
Nop56Q9D6Z1 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
Nop56Q9D6Z1 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Nop56Q9D6Z1 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Nop56Q9D6Z1 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Nop56Q9D6Z1 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Nop56Q9D6Z1 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
Nop56Q9D6Z1 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Nop56Q9D6Z1 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Nop56Q9D6Z1 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC19.31■□□□□ 0.68
Nop56Q9D6Z1 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
Nop56Q9D6Z1 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Nop56Q9D6Z1 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Nop56Q9D6Z1 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Nop56Q9D6Z1 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC19.31■□□□□ 0.68
Nop56Q9D6Z1 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Nop56Q9D6Z1 Gm5812-201ENSMUST00000061073 957 ntBASIC19.31■□□□□ 0.68
Nop56Q9D6Z1 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Nop56Q9D6Z1 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Nop56Q9D6Z1 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Nop56Q9D6Z1 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Nop56Q9D6Z1 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Nop56Q9D6Z1 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Nop56Q9D6Z1 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Nop56Q9D6Z1 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Nop56Q9D6Z1 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Nop56Q9D6Z1 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Nop56Q9D6Z1 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
Nop56Q9D6Z1 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Nop56Q9D6Z1 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Nop56Q9D6Z1 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Nop56Q9D6Z1 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Nop56Q9D6Z1 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
Nop56Q9D6Z1 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Nop56Q9D6Z1 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Nop56Q9D6Z1 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Nop56Q9D6Z1 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Nop56Q9D6Z1 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
Nop56Q9D6Z1 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
Nop56Q9D6Z1 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Nop56Q9D6Z1 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
Nop56Q9D6Z1 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Nop56Q9D6Z1 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Nop56Q9D6Z1 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Nop56Q9D6Z1 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Nop56Q9D6Z1 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Nop56Q9D6Z1 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Nop56Q9D6Z1 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
Nop56Q9D6Z1 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Nop56Q9D6Z1 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
Nop56Q9D6Z1 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Nop56Q9D6Z1 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC19.29■□□□□ 0.68
Nop56Q9D6Z1 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Nop56Q9D6Z1 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Nop56Q9D6Z1 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Nop56Q9D6Z1 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Nop56Q9D6Z1 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Nop56Q9D6Z1 Gm42939-201ENSMUST00000197514 2205 ntBASIC19.28■□□□□ 0.68
Nop56Q9D6Z1 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Nop56Q9D6Z1 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Nop56Q9D6Z1 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC19.28■□□□□ 0.68
Nop56Q9D6Z1 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC19.28■□□□□ 0.68
Nop56Q9D6Z1 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Nop56Q9D6Z1 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Nop56Q9D6Z1 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Nop56Q9D6Z1 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Nop56Q9D6Z1 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Nop56Q9D6Z1 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Nop56Q9D6Z1 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC19.27■□□□□ 0.68
Nop56Q9D6Z1 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Nop56Q9D6Z1 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC19.27■□□□□ 0.68
Nop56Q9D6Z1 Gm22238-201ENSMUST00000175222 88 ntBASIC19.27■□□□□ 0.68
Nop56Q9D6Z1 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Nop56Q9D6Z1 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 19.7 ms