Protein–RNA interactions for Protein: Q9D3S3

Snx29, Sorting nexin-29, mousemouse

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snx29Q9D3S3 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC20.7■□□□□ 0.9
Snx29Q9D3S3 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC20.7■□□□□ 0.9
Snx29Q9D3S3 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Snx29Q9D3S3 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Snx29Q9D3S3 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
Snx29Q9D3S3 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Snx29Q9D3S3 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC20.7■□□□□ 0.9
Snx29Q9D3S3 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Snx29Q9D3S3 Gm37352-201ENSMUST00000193908 2181 ntBASIC20.69■□□□□ 0.9
Snx29Q9D3S3 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Snx29Q9D3S3 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC20.69■□□□□ 0.9
Snx29Q9D3S3 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
Snx29Q9D3S3 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Snx29Q9D3S3 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Snx29Q9D3S3 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC20.69■□□□□ 0.9
Snx29Q9D3S3 AC153881.1-201ENSMUST00000214448 284 ntBASIC20.69■□□□□ 0.9
Snx29Q9D3S3 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Snx29Q9D3S3 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Snx29Q9D3S3 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Snx29Q9D3S3 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Snx29Q9D3S3 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Snx29Q9D3S3 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Snx29Q9D3S3 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
Snx29Q9D3S3 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Snx29Q9D3S3 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC20.68■□□□□ 0.9
Snx29Q9D3S3 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
Snx29Q9D3S3 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC20.68■□□□□ 0.9
Snx29Q9D3S3 AC158538.1-201ENSMUST00000225870 294 ntBASIC20.68■□□□□ 0.9
Snx29Q9D3S3 AC163280.1-201ENSMUST00000228194 1100 ntBASIC20.68■□□□□ 0.9
Snx29Q9D3S3 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
Snx29Q9D3S3 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Snx29Q9D3S3 Flg-201ENSMUST00000050758 1488 ntBASIC20.68■□□□□ 0.9
Snx29Q9D3S3 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Snx29Q9D3S3 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Snx29Q9D3S3 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Snx29Q9D3S3 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Snx29Q9D3S3 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Snx29Q9D3S3 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Snx29Q9D3S3 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Snx29Q9D3S3 Gm715-201ENSMUST00000117865 831 ntBASIC20.67■□□□□ 0.9
Snx29Q9D3S3 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Snx29Q9D3S3 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC20.67■□□□□ 0.9
Snx29Q9D3S3 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC20.67■□□□□ 0.9
Snx29Q9D3S3 Wnt10b-205ENSMUST00000226846 1204 ntBASIC20.67■□□□□ 0.9
Snx29Q9D3S3 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Snx29Q9D3S3 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Snx29Q9D3S3 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
Snx29Q9D3S3 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Snx29Q9D3S3 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Snx29Q9D3S3 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Snx29Q9D3S3 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Snx29Q9D3S3 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Snx29Q9D3S3 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
Snx29Q9D3S3 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Snx29Q9D3S3 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC20.66■□□□□ 0.9
Snx29Q9D3S3 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Snx29Q9D3S3 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Snx29Q9D3S3 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Snx29Q9D3S3 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
Snx29Q9D3S3 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Snx29Q9D3S3 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Snx29Q9D3S3 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Snx29Q9D3S3 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC20.66■□□□□ 0.9
Snx29Q9D3S3 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Snx29Q9D3S3 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Snx29Q9D3S3 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
Snx29Q9D3S3 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Snx29Q9D3S3 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Snx29Q9D3S3 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Snx29Q9D3S3 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC20.65■□□□□ 0.9
Snx29Q9D3S3 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC20.65■□□□□ 0.9
Snx29Q9D3S3 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Snx29Q9D3S3 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Snx29Q9D3S3 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Snx29Q9D3S3 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.9
Snx29Q9D3S3 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC20.64■□□□□ 0.9
Snx29Q9D3S3 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.9
Snx29Q9D3S3 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Snx29Q9D3S3 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Snx29Q9D3S3 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Snx29Q9D3S3 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC20.64■□□□□ 0.89
Snx29Q9D3S3 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Snx29Q9D3S3 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC20.64■□□□□ 0.89
Snx29Q9D3S3 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
Snx29Q9D3S3 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Snx29Q9D3S3 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
Snx29Q9D3S3 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Snx29Q9D3S3 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Snx29Q9D3S3 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Snx29Q9D3S3 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
Snx29Q9D3S3 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Snx29Q9D3S3 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
Snx29Q9D3S3 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
Snx29Q9D3S3 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Snx29Q9D3S3 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
Snx29Q9D3S3 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Snx29Q9D3S3 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Snx29Q9D3S3 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Snx29Q9D3S3 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Snx29Q9D3S3 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 27.4 ms