Protein–RNA interactions for Protein: Q9D3H9

5530401A14Rik, RIKEN cDNA 5530401A14 gene, mousemouse

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
5530401A14RikQ9D3H9 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
5530401A14RikQ9D3H9 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
5530401A14RikQ9D3H9 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
5530401A14RikQ9D3H9 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
5530401A14RikQ9D3H9 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
5530401A14RikQ9D3H9 Gm7856-201ENSMUST00000117514 1493 ntBASIC17.35■□□□□ 0.37
5530401A14RikQ9D3H9 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
5530401A14RikQ9D3H9 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC17.35■□□□□ 0.37
5530401A14RikQ9D3H9 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
5530401A14RikQ9D3H9 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
5530401A14RikQ9D3H9 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
5530401A14RikQ9D3H9 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
5530401A14RikQ9D3H9 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
5530401A14RikQ9D3H9 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
5530401A14RikQ9D3H9 Gm42922-201ENSMUST00000195887 2078 ntBASIC17.34■□□□□ 0.37
5530401A14RikQ9D3H9 Gm42939-201ENSMUST00000197514 2205 ntBASIC17.34■□□□□ 0.37
5530401A14RikQ9D3H9 Gm43017-201ENSMUST00000198296 752 ntBASIC17.34■□□□□ 0.37
5530401A14RikQ9D3H9 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
5530401A14RikQ9D3H9 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
5530401A14RikQ9D3H9 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
5530401A14RikQ9D3H9 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
5530401A14RikQ9D3H9 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
5530401A14RikQ9D3H9 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
5530401A14RikQ9D3H9 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
5530401A14RikQ9D3H9 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
5530401A14RikQ9D3H9 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
5530401A14RikQ9D3H9 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
5530401A14RikQ9D3H9 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
5530401A14RikQ9D3H9 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC17.33■□□□□ 0.37
5530401A14RikQ9D3H9 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
5530401A14RikQ9D3H9 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
5530401A14RikQ9D3H9 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
5530401A14RikQ9D3H9 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
5530401A14RikQ9D3H9 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
5530401A14RikQ9D3H9 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
5530401A14RikQ9D3H9 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
5530401A14RikQ9D3H9 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC17.33■□□□□ 0.36
5530401A14RikQ9D3H9 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC17.33■□□□□ 0.36
5530401A14RikQ9D3H9 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
5530401A14RikQ9D3H9 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
5530401A14RikQ9D3H9 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
5530401A14RikQ9D3H9 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
5530401A14RikQ9D3H9 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
5530401A14RikQ9D3H9 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
5530401A14RikQ9D3H9 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
5530401A14RikQ9D3H9 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
5530401A14RikQ9D3H9 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
5530401A14RikQ9D3H9 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
5530401A14RikQ9D3H9 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
5530401A14RikQ9D3H9 Gm26833-201ENSMUST00000180899 440 ntBASIC17.32■□□□□ 0.36
5530401A14RikQ9D3H9 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
5530401A14RikQ9D3H9 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
5530401A14RikQ9D3H9 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
5530401A14RikQ9D3H9 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
5530401A14RikQ9D3H9 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
5530401A14RikQ9D3H9 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
5530401A14RikQ9D3H9 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
5530401A14RikQ9D3H9 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
5530401A14RikQ9D3H9 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
5530401A14RikQ9D3H9 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
5530401A14RikQ9D3H9 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
5530401A14RikQ9D3H9 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
5530401A14RikQ9D3H9 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
5530401A14RikQ9D3H9 Dmtn-207ENSMUST00000228001 2437 ntBASIC17.31■□□□□ 0.36
5530401A14RikQ9D3H9 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
5530401A14RikQ9D3H9 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
5530401A14RikQ9D3H9 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
5530401A14RikQ9D3H9 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC17.31■□□□□ 0.36
5530401A14RikQ9D3H9 Gm38205-201ENSMUST00000192243 258 ntBASIC17.31■□□□□ 0.36
5530401A14RikQ9D3H9 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC17.31■□□□□ 0.36
5530401A14RikQ9D3H9 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
5530401A14RikQ9D3H9 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
5530401A14RikQ9D3H9 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
5530401A14RikQ9D3H9 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
5530401A14RikQ9D3H9 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
5530401A14RikQ9D3H9 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
5530401A14RikQ9D3H9 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
5530401A14RikQ9D3H9 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC17.3■□□□□ 0.36
5530401A14RikQ9D3H9 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
5530401A14RikQ9D3H9 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC17.3■□□□□ 0.36
5530401A14RikQ9D3H9 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
5530401A14RikQ9D3H9 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC17.3■□□□□ 0.36
5530401A14RikQ9D3H9 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
5530401A14RikQ9D3H9 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
5530401A14RikQ9D3H9 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
5530401A14RikQ9D3H9 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
5530401A14RikQ9D3H9 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
5530401A14RikQ9D3H9 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
5530401A14RikQ9D3H9 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC17.29■□□□□ 0.36
5530401A14RikQ9D3H9 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
5530401A14RikQ9D3H9 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
5530401A14RikQ9D3H9 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
5530401A14RikQ9D3H9 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
5530401A14RikQ9D3H9 AC123834.2-201ENSMUST00000224038 2340 ntBASIC17.29■□□□□ 0.36
5530401A14RikQ9D3H9 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
5530401A14RikQ9D3H9 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
5530401A14RikQ9D3H9 Gm43213-201ENSMUST00000151866 1790 ntBASIC17.29■□□□□ 0.36
5530401A14RikQ9D3H9 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
5530401A14RikQ9D3H9 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
5530401A14RikQ9D3H9 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 30.4 ms