Protein–RNA interactions for Protein: Q9CWU4

UPF0690 protein C1orf52 homolog, mousemouse

Known RBP Predictions only

Length 180 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q9CWU4 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Q9CWU4 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Q9CWU4 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Q9CWU4 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Q9CWU4 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Q9CWU4 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
Q9CWU4 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Q9CWU4 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
Q9CWU4 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC18.35■□□□□ 0.53
Q9CWU4 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Q9CWU4 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Q9CWU4 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Q9CWU4 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
Q9CWU4 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
Q9CWU4 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Q9CWU4 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Q9CWU4 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Q9CWU4 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Q9CWU4 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Q9CWU4 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Q9CWU4 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Q9CWU4 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Q9CWU4 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC18.34■□□□□ 0.53
Q9CWU4 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
Q9CWU4 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC18.34■□□□□ 0.53
Q9CWU4 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC18.34■□□□□ 0.53
Q9CWU4 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
Q9CWU4 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC18.34■□□□□ 0.53
Q9CWU4 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
Q9CWU4 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Q9CWU4 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Q9CWU4 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC18.33■□□□□ 0.53
Q9CWU4 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC18.33■□□□□ 0.53
Q9CWU4 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Q9CWU4 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Q9CWU4 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC18.33■□□□□ 0.52
Q9CWU4 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Q9CWU4 Gm7290-201ENSMUST00000104990 617 ntBASIC18.33■□□□□ 0.52
Q9CWU4 Gm12918-201ENSMUST00000120234 636 ntBASIC18.33■□□□□ 0.52
Q9CWU4 Gm15710-201ENSMUST00000121821 636 ntBASIC18.33■□□□□ 0.52
Q9CWU4 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Q9CWU4 Gm5075-201ENSMUST00000196916 622 ntBASIC18.33■□□□□ 0.52
Q9CWU4 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Q9CWU4 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC18.33■□□□□ 0.52
Q9CWU4 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC18.33■□□□□ 0.52
Q9CWU4 Gm10602-201ENSMUST00000098239 609 ntBASIC18.33■□□□□ 0.52
Q9CWU4 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Q9CWU4 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Q9CWU4 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Q9CWU4 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
Q9CWU4 Gm10167-201ENSMUST00000150411 1479 ntBASIC18.33■□□□□ 0.52
Q9CWU4 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
Q9CWU4 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Q9CWU4 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Q9CWU4 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC18.32■□□□□ 0.52
Q9CWU4 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Q9CWU4 Mir5133-201ENSMUST00000174955 77 ntBASIC18.32■□□□□ 0.52
Q9CWU4 Gm29257-201ENSMUST00000186115 639 ntBASIC18.32■□□□□ 0.52
Q9CWU4 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC18.32■□□□□ 0.52
Q9CWU4 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Q9CWU4 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC18.32■□□□□ 0.52
Q9CWU4 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Q9CWU4 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Q9CWU4 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Q9CWU4 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Q9CWU4 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Q9CWU4 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Q9CWU4 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Q9CWU4 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Q9CWU4 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
Q9CWU4 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
Q9CWU4 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC18.31■□□□□ 0.52
Q9CWU4 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Q9CWU4 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
Q9CWU4 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
Q9CWU4 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Q9CWU4 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Q9CWU4 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Q9CWU4 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Q9CWU4 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
Q9CWU4 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Q9CWU4 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC18.3■□□□□ 0.52
Q9CWU4 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Q9CWU4 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC18.3■□□□□ 0.52
Q9CWU4 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Q9CWU4 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Q9CWU4 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Q9CWU4 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Q9CWU4 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Q9CWU4 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Q9CWU4 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Q9CWU4 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Q9CWU4 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Q9CWU4 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Q9CWU4 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Q9CWU4 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Q9CWU4 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Q9CWU4 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
Q9CWU4 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Q9CWU4 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 19.8 ms