Protein–RNA interactions for Protein: Q9CWS1

Rnf135, E3 ubiquitin-protein ligase RNF135, mousemouse

Predictions only

Length 417 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf135Q9CWS1 Gm42569-201ENSMUST00000200539 472 ntBASIC19.48■□□□□ 0.71
Rnf135Q9CWS1 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Rnf135Q9CWS1 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
Rnf135Q9CWS1 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC19.48■□□□□ 0.71
Rnf135Q9CWS1 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Rnf135Q9CWS1 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Rnf135Q9CWS1 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
Rnf135Q9CWS1 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
Rnf135Q9CWS1 Gm15853-202ENSMUST00000195518 2041 ntBASIC19.47■□□□□ 0.71
Rnf135Q9CWS1 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Rnf135Q9CWS1 AC137127.1-201ENSMUST00000213466 1078 ntBASIC19.47■□□□□ 0.71
Rnf135Q9CWS1 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC19.47■□□□□ 0.71
Rnf135Q9CWS1 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Rnf135Q9CWS1 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Rnf135Q9CWS1 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC19.47■□□□□ 0.71
Rnf135Q9CWS1 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Rnf135Q9CWS1 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Rnf135Q9CWS1 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
Rnf135Q9CWS1 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC19.46■□□□□ 0.71
Rnf135Q9CWS1 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Rnf135Q9CWS1 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC19.46■□□□□ 0.71
Rnf135Q9CWS1 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Rnf135Q9CWS1 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
Rnf135Q9CWS1 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
Rnf135Q9CWS1 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Rnf135Q9CWS1 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Rnf135Q9CWS1 Dmtn-210ENSMUST00000228824 2377 ntBASIC19.46■□□□□ 0.71
Rnf135Q9CWS1 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Rnf135Q9CWS1 Gm5953-201ENSMUST00000220644 2616 ntBASIC19.45■□□□□ 0.7
Rnf135Q9CWS1 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Rnf135Q9CWS1 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Rnf135Q9CWS1 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Rnf135Q9CWS1 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Rnf135Q9CWS1 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC19.45■□□□□ 0.7
Rnf135Q9CWS1 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Rnf135Q9CWS1 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC19.45■□□□□ 0.7
Rnf135Q9CWS1 CT030146.1-201ENSMUST00000220919 217 ntBASIC19.45■□□□□ 0.7
Rnf135Q9CWS1 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Rnf135Q9CWS1 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Rnf135Q9CWS1 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Rnf135Q9CWS1 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
Rnf135Q9CWS1 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Rnf135Q9CWS1 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Rnf135Q9CWS1 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Rnf135Q9CWS1 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Rnf135Q9CWS1 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Rnf135Q9CWS1 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC19.44■□□□□ 0.7
Rnf135Q9CWS1 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Rnf135Q9CWS1 Gm27405-201ENSMUST00000184201 112 ntBASIC19.44■□□□□ 0.7
Rnf135Q9CWS1 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC19.44■□□□□ 0.7
Rnf135Q9CWS1 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC19.44■□□□□ 0.7
Rnf135Q9CWS1 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC19.44■□□□□ 0.7
Rnf135Q9CWS1 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC19.44■□□□□ 0.7
Rnf135Q9CWS1 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Rnf135Q9CWS1 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC19.44■□□□□ 0.7
Rnf135Q9CWS1 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Rnf135Q9CWS1 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
Rnf135Q9CWS1 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
Rnf135Q9CWS1 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Rnf135Q9CWS1 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Rnf135Q9CWS1 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Rnf135Q9CWS1 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC19.43■□□□□ 0.7
Rnf135Q9CWS1 Gm7860-201ENSMUST00000121190 879 ntBASIC19.43■□□□□ 0.7
Rnf135Q9CWS1 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC19.43■□□□□ 0.7
Rnf135Q9CWS1 Gm42642-201ENSMUST00000200683 355 ntBASIC19.43■□□□□ 0.7
Rnf135Q9CWS1 Gm40848-201ENSMUST00000221998 324 ntBASIC19.43■□□□□ 0.7
Rnf135Q9CWS1 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Rnf135Q9CWS1 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Rnf135Q9CWS1 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC19.43■□□□□ 0.7
Rnf135Q9CWS1 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Rnf135Q9CWS1 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC19.43■□□□□ 0.7
Rnf135Q9CWS1 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Rnf135Q9CWS1 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
Rnf135Q9CWS1 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
Rnf135Q9CWS1 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Rnf135Q9CWS1 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Rnf135Q9CWS1 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Rnf135Q9CWS1 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
Rnf135Q9CWS1 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Rnf135Q9CWS1 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Rnf135Q9CWS1 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Rnf135Q9CWS1 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
Rnf135Q9CWS1 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC19.42■□□□□ 0.7
Rnf135Q9CWS1 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
Rnf135Q9CWS1 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC19.42■□□□□ 0.7
Rnf135Q9CWS1 Gm26571-201ENSMUST00000181399 666 ntBASIC19.42■□□□□ 0.7
Rnf135Q9CWS1 AC099934.2-201ENSMUST00000196389 70 ntBASIC19.42■□□□□ 0.7
Rnf135Q9CWS1 AC156953.1-201ENSMUST00000196953 70 ntBASIC19.42■□□□□ 0.7
Rnf135Q9CWS1 AC157822.2-201ENSMUST00000200291 70 ntBASIC19.42■□□□□ 0.7
Rnf135Q9CWS1 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Rnf135Q9CWS1 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Rnf135Q9CWS1 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Rnf135Q9CWS1 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC19.41■□□□□ 0.7
Rnf135Q9CWS1 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Rnf135Q9CWS1 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Rnf135Q9CWS1 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC19.41■□□□□ 0.7
Rnf135Q9CWS1 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Rnf135Q9CWS1 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
Rnf135Q9CWS1 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
Rnf135Q9CWS1 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 39.9 ms