Protein–RNA interactions for Protein: Q9CQS8

Sec61b, Protein transport protein Sec61 subunit beta, mousemouse

Known RBP Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61bQ9CQS8 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC10.05□□□□□ -0.8
Sec61bQ9CQS8 Gm44672-201ENSMUST00000206944 1098 ntBASIC10.05□□□□□ -0.8
Sec61bQ9CQS8 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Sec61bQ9CQS8 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Sec61bQ9CQS8 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Sec61bQ9CQS8 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Sec61bQ9CQS8 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC10.05□□□□□ -0.8
Sec61bQ9CQS8 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC10.05□□□□□ -0.8
Sec61bQ9CQS8 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC10.05□□□□□ -0.8
Sec61bQ9CQS8 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Sec61bQ9CQS8 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC10.05□□□□□ -0.8
Sec61bQ9CQS8 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC10.05□□□□□ -0.8
Sec61bQ9CQS8 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC10.05□□□□□ -0.8
Sec61bQ9CQS8 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Sec61bQ9CQS8 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC10.04□□□□□ -0.8
Sec61bQ9CQS8 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC10.04□□□□□ -0.8
Sec61bQ9CQS8 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Sec61bQ9CQS8 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Sec61bQ9CQS8 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC10.04□□□□□ -0.8
Sec61bQ9CQS8 AC131586.2-201ENSMUST00000228370 1512 ntBASIC10.04□□□□□ -0.8
Sec61bQ9CQS8 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC10.04□□□□□ -0.8
Sec61bQ9CQS8 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Sec61bQ9CQS8 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Sec61bQ9CQS8 Gm12527-201ENSMUST00000117967 564 ntBASIC10.04□□□□□ -0.8
Sec61bQ9CQS8 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC10.04□□□□□ -0.8
Sec61bQ9CQS8 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Sec61bQ9CQS8 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC10.04□□□□□ -0.8
Sec61bQ9CQS8 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC10.04□□□□□ -0.8
Sec61bQ9CQS8 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Sec61bQ9CQS8 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Sec61bQ9CQS8 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Sec61bQ9CQS8 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC10.04□□□□□ -0.8
Sec61bQ9CQS8 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Sec61bQ9CQS8 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC10.04□□□□□ -0.8
Sec61bQ9CQS8 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Sec61bQ9CQS8 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC10.04□□□□□ -0.8
Sec61bQ9CQS8 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Sec61bQ9CQS8 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC10.04□□□□□ -0.8
Sec61bQ9CQS8 AC152827.1-201ENSMUST00000221143 2189 ntBASIC10.04□□□□□ -0.8
Sec61bQ9CQS8 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC10.04□□□□□ -0.8
Sec61bQ9CQS8 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Sec61bQ9CQS8 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC10.04□□□□□ -0.8
Sec61bQ9CQS8 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Sec61bQ9CQS8 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Sec61bQ9CQS8 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Sec61bQ9CQS8 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Sec61bQ9CQS8 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC10.03□□□□□ -0.8
Sec61bQ9CQS8 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Sec61bQ9CQS8 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Sec61bQ9CQS8 Gm6802-201ENSMUST00000167843 1983 ntBASIC10.03□□□□□ -0.8
Sec61bQ9CQS8 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC10.03□□□□□ -0.8
Sec61bQ9CQS8 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC10.03□□□□□ -0.8
Sec61bQ9CQS8 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC10.03□□□□□ -0.8
Sec61bQ9CQS8 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC10.03□□□□□ -0.8
Sec61bQ9CQS8 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC10.03□□□□□ -0.8
Sec61bQ9CQS8 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Sec61bQ9CQS8 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC10.03□□□□□ -0.8
Sec61bQ9CQS8 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Sec61bQ9CQS8 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Sec61bQ9CQS8 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC10.03□□□□□ -0.8
Sec61bQ9CQS8 P4ha1-202ENSMUST00000092512 2387 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Sec61bQ9CQS8 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC10.03□□□□□ -0.8
Sec61bQ9CQS8 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC10.03□□□□□ -0.8
Sec61bQ9CQS8 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Sec61bQ9CQS8 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC10.03□□□□□ -0.8
Sec61bQ9CQS8 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC10.03□□□□□ -0.8
Sec61bQ9CQS8 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC10.03□□□□□ -0.8
Sec61bQ9CQS8 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Sec61bQ9CQS8 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC10.03□□□□□ -0.8
Sec61bQ9CQS8 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC10.02□□□□□ -0.8
Sec61bQ9CQS8 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC10.02□□□□□ -0.8
Sec61bQ9CQS8 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC10.02□□□□□ -0.8
Sec61bQ9CQS8 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.8
Sec61bQ9CQS8 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.8
Sec61bQ9CQS8 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.8
Sec61bQ9CQS8 Gm37648-201ENSMUST00000192072 2563 ntBASIC10.02□□□□□ -0.81
Sec61bQ9CQS8 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Sec61bQ9CQS8 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC10.02□□□□□ -0.81
Sec61bQ9CQS8 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC10.02□□□□□ -0.81
Sec61bQ9CQS8 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC10.02□□□□□ -0.81
Sec61bQ9CQS8 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC10.02□□□□□ -0.81
Sec61bQ9CQS8 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC10.02□□□□□ -0.81
Sec61bQ9CQS8 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC10.02□□□□□ -0.81
Sec61bQ9CQS8 Gm26524-201ENSMUST00000192339 390 ntBASIC10.02□□□□□ -0.81
Sec61bQ9CQS8 Gm37444-201ENSMUST00000193605 439 ntBASIC10.02□□□□□ -0.81
Sec61bQ9CQS8 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC10.02□□□□□ -0.81
Sec61bQ9CQS8 Gm44878-201ENSMUST00000205812 1295 ntBASIC10.02□□□□□ -0.81
Sec61bQ9CQS8 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC10.02□□□□□ -0.81
Sec61bQ9CQS8 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Sec61bQ9CQS8 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC10.02□□□□□ -0.81
Sec61bQ9CQS8 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Sec61bQ9CQS8 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC10.02□□□□□ -0.81
Sec61bQ9CQS8 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC10.02□□□□□ -0.81
Sec61bQ9CQS8 Gm13509-201ENSMUST00000119733 1308 ntBASIC10.02□□□□□ -0.81
Sec61bQ9CQS8 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Sec61bQ9CQS8 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Sec61bQ9CQS8 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC10.02□□□□□ -0.81
Sec61bQ9CQS8 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Sec61bQ9CQS8 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Sec61bQ9CQS8 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC10.02□□□□□ -0.81
Retrieved 100 of 76,532 protein–RNA pairs in 30.7 ms