Protein–RNA interactions for Protein: Q9CPV1

Ska1, Spindle and kinetochore-associated protein 1, mousemouse

Predictions only

Length 254 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ska1Q9CPV1 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ska1Q9CPV1 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ska1Q9CPV1 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ska1Q9CPV1 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
Ska1Q9CPV1 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Ska1Q9CPV1 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ska1Q9CPV1 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ska1Q9CPV1 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ska1Q9CPV1 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ska1Q9CPV1 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ska1Q9CPV1 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ska1Q9CPV1 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ska1Q9CPV1 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
Ska1Q9CPV1 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ska1Q9CPV1 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ska1Q9CPV1 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Ska1Q9CPV1 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC17.62■□□□□ 0.41
Ska1Q9CPV1 AC140930.3-201ENSMUST00000222935 274 ntBASIC17.62■□□□□ 0.41
Ska1Q9CPV1 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Ska1Q9CPV1 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ska1Q9CPV1 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ska1Q9CPV1 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
Ska1Q9CPV1 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
Ska1Q9CPV1 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ska1Q9CPV1 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ska1Q9CPV1 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC17.62■□□□□ 0.41
Ska1Q9CPV1 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ska1Q9CPV1 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ska1Q9CPV1 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Ska1Q9CPV1 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC17.61■□□□□ 0.41
Ska1Q9CPV1 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC17.61■□□□□ 0.41
Ska1Q9CPV1 Gm7160-202ENSMUST00000188519 1027 ntBASIC17.61■□□□□ 0.41
Ska1Q9CPV1 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ska1Q9CPV1 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC17.61■□□□□ 0.41
Ska1Q9CPV1 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ska1Q9CPV1 Gm42911-201ENSMUST00000199360 1630 ntBASIC17.61■□□□□ 0.41
Ska1Q9CPV1 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
Ska1Q9CPV1 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
Ska1Q9CPV1 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ska1Q9CPV1 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ska1Q9CPV1 Gm42939-201ENSMUST00000197514 2205 ntBASIC17.6■□□□□ 0.41
Ska1Q9CPV1 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ska1Q9CPV1 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ska1Q9CPV1 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ska1Q9CPV1 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ska1Q9CPV1 Gm43137-201ENSMUST00000198052 594 ntBASIC17.6■□□□□ 0.41
Ska1Q9CPV1 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ska1Q9CPV1 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ska1Q9CPV1 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC17.6■□□□□ 0.41
Ska1Q9CPV1 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ska1Q9CPV1 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ska1Q9CPV1 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ska1Q9CPV1 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Ska1Q9CPV1 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
Ska1Q9CPV1 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ska1Q9CPV1 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC17.6■□□□□ 0.41
Ska1Q9CPV1 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ska1Q9CPV1 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ska1Q9CPV1 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
Ska1Q9CPV1 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ska1Q9CPV1 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ska1Q9CPV1 Gm15853-202ENSMUST00000195518 2041 ntBASIC17.59■□□□□ 0.41
Ska1Q9CPV1 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ska1Q9CPV1 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ska1Q9CPV1 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ska1Q9CPV1 Gm43034-201ENSMUST00000198678 1364 ntBASIC17.59■□□□□ 0.41
Ska1Q9CPV1 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Ska1Q9CPV1 Serp2-204ENSMUST00000228055 705 ntBASIC17.59■□□□□ 0.41
Ska1Q9CPV1 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
Ska1Q9CPV1 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Ska1Q9CPV1 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ska1Q9CPV1 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Ska1Q9CPV1 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
Ska1Q9CPV1 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC17.59■□□□□ 0.41
Ska1Q9CPV1 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ska1Q9CPV1 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Ska1Q9CPV1 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.41
Ska1Q9CPV1 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC17.58■□□□□ 0.41
Ska1Q9CPV1 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC17.58■□□□□ 0.41
Ska1Q9CPV1 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Ska1Q9CPV1 Gm44832-201ENSMUST00000208849 2303 ntBASIC17.58■□□□□ 0.41
Ska1Q9CPV1 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Ska1Q9CPV1 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC17.58■□□□□ 0.4
Ska1Q9CPV1 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
Ska1Q9CPV1 Spcs1-204ENSMUST00000226782 949 ntBASIC17.58■□□□□ 0.4
Ska1Q9CPV1 Gm45141-201ENSMUST00000206502 1888 ntBASIC17.58■□□□□ 0.4
Ska1Q9CPV1 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Ska1Q9CPV1 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
Ska1Q9CPV1 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
Ska1Q9CPV1 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Ska1Q9CPV1 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Ska1Q9CPV1 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ska1Q9CPV1 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ska1Q9CPV1 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ska1Q9CPV1 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ska1Q9CPV1 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ska1Q9CPV1 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Ska1Q9CPV1 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
Ska1Q9CPV1 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Ska1Q9CPV1 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC17.57■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 48.9 ms