Protein–RNA interactions for Protein: Q99PF4

Cdh23, Cadherin-23, mousemouse

Predictions only

Length 3,354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh23Q99PF4 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC19.37■□□□□ 0.69
Cdh23Q99PF4 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
Cdh23Q99PF4 Wnt10b-205ENSMUST00000226846 1204 ntBASIC19.37■□□□□ 0.69
Cdh23Q99PF4 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Cdh23Q99PF4 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Cdh23Q99PF4 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC19.37■□□□□ 0.69
Cdh23Q99PF4 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Cdh23Q99PF4 Gm30025-201ENSMUST00000218555 728 ntBASIC19.37■□□□□ 0.69
Cdh23Q99PF4 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
Cdh23Q99PF4 Gm9103-201ENSMUST00000119371 405 ntBASIC19.36■□□□□ 0.69
Cdh23Q99PF4 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Cdh23Q99PF4 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
Cdh23Q99PF4 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Cdh23Q99PF4 Mras-203ENSMUST00000122384 1122 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Cdh23Q99PF4 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Cdh23Q99PF4 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Cdh23Q99PF4 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Cdh23Q99PF4 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Cdh23Q99PF4 Gm7461-201ENSMUST00000058918 827 ntBASIC19.36■□□□□ 0.69
Cdh23Q99PF4 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Cdh23Q99PF4 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Cdh23Q99PF4 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Cdh23Q99PF4 AC154471.1-201ENSMUST00000224418 436 ntBASIC19.35■□□□□ 0.69
Cdh23Q99PF4 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Cdh23Q99PF4 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Cdh23Q99PF4 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC19.35■□□□□ 0.69
Cdh23Q99PF4 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Cdh23Q99PF4 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC19.35■□□□□ 0.69
Cdh23Q99PF4 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Cdh23Q99PF4 AC154266.1-201ENSMUST00000223190 503 ntBASIC19.35■□□□□ 0.69
Cdh23Q99PF4 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Cdh23Q99PF4 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Cdh23Q99PF4 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Cdh23Q99PF4 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
Cdh23Q99PF4 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Cdh23Q99PF4 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Cdh23Q99PF4 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Cdh23Q99PF4 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
Cdh23Q99PF4 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Cdh23Q99PF4 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Cdh23Q99PF4 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Cdh23Q99PF4 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Cdh23Q99PF4 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
Cdh23Q99PF4 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Cdh23Q99PF4 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC19.34■□□□□ 0.69
Cdh23Q99PF4 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC19.33■□□□□ 0.69
Cdh23Q99PF4 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Cdh23Q99PF4 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Cdh23Q99PF4 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC19.33■□□□□ 0.69
Cdh23Q99PF4 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Cdh23Q99PF4 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
Cdh23Q99PF4 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC19.33■□□□□ 0.69
Cdh23Q99PF4 Gm10013-201ENSMUST00000106074 672 ntBASIC19.33■□□□□ 0.69
Cdh23Q99PF4 AA414768-201ENSMUST00000121924 1257 ntBASIC19.33■□□□□ 0.69
Cdh23Q99PF4 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Cdh23Q99PF4 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
Cdh23Q99PF4 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Cdh23Q99PF4 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Cdh23Q99PF4 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC19.32■□□□□ 0.68
Cdh23Q99PF4 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
Cdh23Q99PF4 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Cdh23Q99PF4 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Cdh23Q99PF4 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Cdh23Q99PF4 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
Cdh23Q99PF4 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
Cdh23Q99PF4 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Cdh23Q99PF4 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Cdh23Q99PF4 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Cdh23Q99PF4 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
Cdh23Q99PF4 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
Cdh23Q99PF4 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Cdh23Q99PF4 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Cdh23Q99PF4 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Cdh23Q99PF4 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Cdh23Q99PF4 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Cdh23Q99PF4 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Cdh23Q99PF4 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
Cdh23Q99PF4 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Cdh23Q99PF4 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Cdh23Q99PF4 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Cdh23Q99PF4 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Cdh23Q99PF4 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC19.3■□□□□ 0.68
Cdh23Q99PF4 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC19.3■□□□□ 0.68
Cdh23Q99PF4 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC19.3■□□□□ 0.68
Cdh23Q99PF4 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC19.3■□□□□ 0.68
Cdh23Q99PF4 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
Cdh23Q99PF4 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Cdh23Q99PF4 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Cdh23Q99PF4 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Cdh23Q99PF4 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Cdh23Q99PF4 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Cdh23Q99PF4 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Cdh23Q99PF4 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Cdh23Q99PF4 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Cdh23Q99PF4 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Cdh23Q99PF4 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Cdh23Q99PF4 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Cdh23Q99PF4 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Cdh23Q99PF4 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Cdh23Q99PF4 AC133598.3-202ENSMUST00000224219 531 ntBASIC19.29■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 33.9 ms