Protein–RNA interactions for Protein: Q99MQ5

Col25a1, Collagen alpha-1(XXV) chain, mousemouse

Predictions only

Length 666 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col25a1Q99MQ5 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC19.46■□□□□ 0.71
Col25a1Q99MQ5 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Col25a1Q99MQ5 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC19.46■□□□□ 0.71
Col25a1Q99MQ5 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Col25a1Q99MQ5 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Col25a1Q99MQ5 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Col25a1Q99MQ5 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Col25a1Q99MQ5 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
Col25a1Q99MQ5 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Col25a1Q99MQ5 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Col25a1Q99MQ5 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Col25a1Q99MQ5 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Col25a1Q99MQ5 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Col25a1Q99MQ5 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Col25a1Q99MQ5 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Col25a1Q99MQ5 Gm43514-201ENSMUST00000198852 424 ntBASIC19.45■□□□□ 0.7
Col25a1Q99MQ5 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC19.45■□□□□ 0.7
Col25a1Q99MQ5 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC19.45■□□□□ 0.7
Col25a1Q99MQ5 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC19.45■□□□□ 0.7
Col25a1Q99MQ5 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Col25a1Q99MQ5 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Col25a1Q99MQ5 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Col25a1Q99MQ5 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC19.44■□□□□ 0.7
Col25a1Q99MQ5 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC19.44■□□□□ 0.7
Col25a1Q99MQ5 Nnat-202ENSMUST00000109526 1213 ntAPPRIS P4 TSL 1 (best) BASIC19.44■□□□□ 0.7
Col25a1Q99MQ5 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Col25a1Q99MQ5 Rpl19-ps10-201ENSMUST00000205555 330 ntBASIC19.44■□□□□ 0.7
Col25a1Q99MQ5 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Col25a1Q99MQ5 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Col25a1Q99MQ5 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Col25a1Q99MQ5 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
Col25a1Q99MQ5 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
Col25a1Q99MQ5 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Col25a1Q99MQ5 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Col25a1Q99MQ5 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Col25a1Q99MQ5 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Col25a1Q99MQ5 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Col25a1Q99MQ5 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Col25a1Q99MQ5 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Col25a1Q99MQ5 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Col25a1Q99MQ5 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC19.43■□□□□ 0.7
Col25a1Q99MQ5 Gm11539-201ENSMUST00000119837 557 ntBASIC19.43■□□□□ 0.7
Col25a1Q99MQ5 Gm13436-201ENSMUST00000120418 567 ntBASIC19.43■□□□□ 0.7
Col25a1Q99MQ5 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Col25a1Q99MQ5 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Col25a1Q99MQ5 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Col25a1Q99MQ5 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Col25a1Q99MQ5 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Col25a1Q99MQ5 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
Col25a1Q99MQ5 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Col25a1Q99MQ5 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Col25a1Q99MQ5 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Col25a1Q99MQ5 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Col25a1Q99MQ5 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Col25a1Q99MQ5 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Col25a1Q99MQ5 AC107452.1-201ENSMUST00000227963 481 ntBASIC19.42■□□□□ 0.7
Col25a1Q99MQ5 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Col25a1Q99MQ5 Idnk-201ENSMUST00000051490 764 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Col25a1Q99MQ5 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Col25a1Q99MQ5 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
Col25a1Q99MQ5 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC19.42■□□□□ 0.7
Col25a1Q99MQ5 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Col25a1Q99MQ5 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC19.42■□□□□ 0.7
Col25a1Q99MQ5 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
Col25a1Q99MQ5 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
Col25a1Q99MQ5 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Col25a1Q99MQ5 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Col25a1Q99MQ5 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Col25a1Q99MQ5 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Col25a1Q99MQ5 Gm2399-201ENSMUST00000104944 225 ntBASIC19.41■□□□□ 0.7
Col25a1Q99MQ5 Ppil3-202ENSMUST00000114345 1175 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Col25a1Q99MQ5 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Col25a1Q99MQ5 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC19.41■□□□□ 0.7
Col25a1Q99MQ5 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
Col25a1Q99MQ5 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Col25a1Q99MQ5 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Col25a1Q99MQ5 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Col25a1Q99MQ5 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Col25a1Q99MQ5 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Col25a1Q99MQ5 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Col25a1Q99MQ5 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Col25a1Q99MQ5 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC19.4■□□□□ 0.7
Col25a1Q99MQ5 Mir6236-201ENSMUST00000184437 123 ntBASIC19.4■□□□□ 0.7
Col25a1Q99MQ5 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Col25a1Q99MQ5 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Col25a1Q99MQ5 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
Col25a1Q99MQ5 AC131586.2-201ENSMUST00000228370 1512 ntBASIC19.4■□□□□ 0.7
Col25a1Q99MQ5 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Col25a1Q99MQ5 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Col25a1Q99MQ5 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Col25a1Q99MQ5 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
Col25a1Q99MQ5 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Col25a1Q99MQ5 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Col25a1Q99MQ5 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC19.39■□□□□ 0.69
Col25a1Q99MQ5 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Col25a1Q99MQ5 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC19.39■□□□□ 0.69
Col25a1Q99MQ5 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Col25a1Q99MQ5 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Col25a1Q99MQ5 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Col25a1Q99MQ5 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 19 ms