Protein–RNA interactions for Protein: Q99MB1

Tlr3, Toll-like receptor 3, mousemouse

Predictions only

Length 905 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tlr3Q99MB1 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Tlr3Q99MB1 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
Tlr3Q99MB1 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Tlr3Q99MB1 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Tlr3Q99MB1 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Tlr3Q99MB1 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Tlr3Q99MB1 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Tlr3Q99MB1 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Tlr3Q99MB1 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC20.1■□□□□ 0.81
Tlr3Q99MB1 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Tlr3Q99MB1 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Tlr3Q99MB1 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Tlr3Q99MB1 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Tlr3Q99MB1 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
Tlr3Q99MB1 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Tlr3Q99MB1 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Tlr3Q99MB1 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Tlr3Q99MB1 Rncr4-201ENSMUST00000194541 2234 ntBASIC20.1■□□□□ 0.81
Tlr3Q99MB1 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Tlr3Q99MB1 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Tlr3Q99MB1 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Tlr3Q99MB1 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Tlr3Q99MB1 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Tlr3Q99MB1 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Tlr3Q99MB1 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Tlr3Q99MB1 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Tlr3Q99MB1 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC20.09■□□□□ 0.81
Tlr3Q99MB1 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Tlr3Q99MB1 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC20.09■□□□□ 0.81
Tlr3Q99MB1 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Tlr3Q99MB1 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Tlr3Q99MB1 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC20.08■□□□□ 0.81
Tlr3Q99MB1 Golph3-205ENSMUST00000228671 2842 ntBASIC20.08■□□□□ 0.81
Tlr3Q99MB1 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Tlr3Q99MB1 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Tlr3Q99MB1 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Tlr3Q99MB1 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
Tlr3Q99MB1 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Tlr3Q99MB1 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.81
Tlr3Q99MB1 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Tlr3Q99MB1 Gm10602-201ENSMUST00000098239 609 ntBASIC20.08■□□□□ 0.81
Tlr3Q99MB1 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC20.08■□□□□ 0.8
Tlr3Q99MB1 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
Tlr3Q99MB1 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.8
Tlr3Q99MB1 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
Tlr3Q99MB1 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Tlr3Q99MB1 Gm43231-201ENSMUST00000202960 2258 ntBASIC20.07■□□□□ 0.8
Tlr3Q99MB1 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Tlr3Q99MB1 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
Tlr3Q99MB1 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
Tlr3Q99MB1 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC20.07■□□□□ 0.8
Tlr3Q99MB1 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Tlr3Q99MB1 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Tlr3Q99MB1 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
Tlr3Q99MB1 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
Tlr3Q99MB1 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Tlr3Q99MB1 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
Tlr3Q99MB1 Gm27011-201ENSMUST00000182352 972 ntBASIC20.07■□□□□ 0.8
Tlr3Q99MB1 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Tlr3Q99MB1 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Tlr3Q99MB1 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Tlr3Q99MB1 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Tlr3Q99MB1 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Tlr3Q99MB1 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Tlr3Q99MB1 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
Tlr3Q99MB1 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Tlr3Q99MB1 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Tlr3Q99MB1 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Tlr3Q99MB1 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Tlr3Q99MB1 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Tlr3Q99MB1 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Tlr3Q99MB1 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
Tlr3Q99MB1 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC20.06■□□□□ 0.8
Tlr3Q99MB1 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Tlr3Q99MB1 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Tlr3Q99MB1 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC20.06■□□□□ 0.8
Tlr3Q99MB1 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Tlr3Q99MB1 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
Tlr3Q99MB1 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Tlr3Q99MB1 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC20.05■□□□□ 0.8
Tlr3Q99MB1 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Tlr3Q99MB1 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
Tlr3Q99MB1 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
Tlr3Q99MB1 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Tlr3Q99MB1 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC20.05■□□□□ 0.8
Tlr3Q99MB1 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Tlr3Q99MB1 Gm13534-201ENSMUST00000121169 513 ntBASIC20.05■□□□□ 0.8
Tlr3Q99MB1 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
Tlr3Q99MB1 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC20.05■□□□□ 0.8
Tlr3Q99MB1 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
Tlr3Q99MB1 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Tlr3Q99MB1 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC20.05■□□□□ 0.8
Tlr3Q99MB1 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
Tlr3Q99MB1 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
Tlr3Q99MB1 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Tlr3Q99MB1 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Tlr3Q99MB1 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC20.05■□□□□ 0.8
Tlr3Q99MB1 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Tlr3Q99MB1 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Tlr3Q99MB1 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Retrieved 100 of 76,532 protein–RNA pairs in 13.1 ms