Protein–RNA interactions for Protein: Q99LI2

Clcc1, Chloride channel CLIC-like protein 1, mousemouse

Predictions only

Length 539 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcc1Q99LI2 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC18.52■□□□□ 0.55
Clcc1Q99LI2 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Clcc1Q99LI2 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC18.51■□□□□ 0.55
Clcc1Q99LI2 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
Clcc1Q99LI2 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
Clcc1Q99LI2 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
Clcc1Q99LI2 Gm12527-201ENSMUST00000117967 564 ntBASIC18.51■□□□□ 0.55
Clcc1Q99LI2 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Clcc1Q99LI2 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC18.51■□□□□ 0.55
Clcc1Q99LI2 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Clcc1Q99LI2 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Clcc1Q99LI2 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Clcc1Q99LI2 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Clcc1Q99LI2 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Clcc1Q99LI2 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Clcc1Q99LI2 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Clcc1Q99LI2 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Clcc1Q99LI2 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
Clcc1Q99LI2 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC18.5■□□□□ 0.55
Clcc1Q99LI2 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Clcc1Q99LI2 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Clcc1Q99LI2 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC18.5■□□□□ 0.55
Clcc1Q99LI2 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC18.5■□□□□ 0.55
Clcc1Q99LI2 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC18.5■□□□□ 0.55
Clcc1Q99LI2 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Clcc1Q99LI2 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
Clcc1Q99LI2 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Clcc1Q99LI2 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Clcc1Q99LI2 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Clcc1Q99LI2 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
Clcc1Q99LI2 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Clcc1Q99LI2 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
Clcc1Q99LI2 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Clcc1Q99LI2 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Clcc1Q99LI2 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Clcc1Q99LI2 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
Clcc1Q99LI2 Gm26971-201ENSMUST00000182423 1072 ntBASIC18.49■□□□□ 0.55
Clcc1Q99LI2 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Clcc1Q99LI2 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Clcc1Q99LI2 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
Clcc1Q99LI2 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Clcc1Q99LI2 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC18.48■□□□□ 0.55
Clcc1Q99LI2 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC18.48■□□□□ 0.55
Clcc1Q99LI2 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC18.48■□□□□ 0.55
Clcc1Q99LI2 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC18.48■□□□□ 0.55
Clcc1Q99LI2 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
Clcc1Q99LI2 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Clcc1Q99LI2 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
Clcc1Q99LI2 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Clcc1Q99LI2 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Clcc1Q99LI2 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
Clcc1Q99LI2 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC18.48■□□□□ 0.55
Clcc1Q99LI2 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Clcc1Q99LI2 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Clcc1Q99LI2 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
Clcc1Q99LI2 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC18.47■□□□□ 0.55
Clcc1Q99LI2 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Clcc1Q99LI2 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Clcc1Q99LI2 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC18.47■□□□□ 0.55
Clcc1Q99LI2 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Clcc1Q99LI2 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Clcc1Q99LI2 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Clcc1Q99LI2 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Clcc1Q99LI2 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Clcc1Q99LI2 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Clcc1Q99LI2 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Clcc1Q99LI2 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Clcc1Q99LI2 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC18.47■□□□□ 0.55
Clcc1Q99LI2 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC18.46■□□□□ 0.55
Clcc1Q99LI2 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Clcc1Q99LI2 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
Clcc1Q99LI2 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Clcc1Q99LI2 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
Clcc1Q99LI2 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC18.46■□□□□ 0.55
Clcc1Q99LI2 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
Clcc1Q99LI2 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
Clcc1Q99LI2 Gm44672-201ENSMUST00000206944 1098 ntBASIC18.46■□□□□ 0.55
Clcc1Q99LI2 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Clcc1Q99LI2 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
Clcc1Q99LI2 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Clcc1Q99LI2 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC18.46■□□□□ 0.55
Clcc1Q99LI2 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
Clcc1Q99LI2 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Clcc1Q99LI2 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Clcc1Q99LI2 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
Clcc1Q99LI2 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
Clcc1Q99LI2 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC18.45■□□□□ 0.54
Clcc1Q99LI2 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Clcc1Q99LI2 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Clcc1Q99LI2 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Clcc1Q99LI2 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC18.45■□□□□ 0.54
Clcc1Q99LI2 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC18.45■□□□□ 0.54
Clcc1Q99LI2 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Clcc1Q99LI2 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Clcc1Q99LI2 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Clcc1Q99LI2 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Clcc1Q99LI2 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Clcc1Q99LI2 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Clcc1Q99LI2 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Clcc1Q99LI2 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 14.7 ms