Protein–RNA interactions for Protein: Q99K46

Usp11, Ubiquitin carboxyl-terminal hydrolase 11, mousemouse

Predictions only

Length 921 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp11Q99K46 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC19.68■□□□□ 0.74
Usp11Q99K46 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC19.68■□□□□ 0.74
Usp11Q99K46 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
Usp11Q99K46 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Usp11Q99K46 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
Usp11Q99K46 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Usp11Q99K46 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Usp11Q99K46 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Usp11Q99K46 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Usp11Q99K46 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
Usp11Q99K46 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Usp11Q99K46 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Usp11Q99K46 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Usp11Q99K46 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
Usp11Q99K46 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Usp11Q99K46 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
Usp11Q99K46 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Usp11Q99K46 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Usp11Q99K46 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Usp11Q99K46 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Usp11Q99K46 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Usp11Q99K46 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Usp11Q99K46 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
Usp11Q99K46 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC19.66■□□□□ 0.74
Usp11Q99K46 Gm27801-201ENSMUST00000184174 223 ntBASIC19.66■□□□□ 0.74
Usp11Q99K46 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Usp11Q99K46 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Usp11Q99K46 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Usp11Q99K46 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
Usp11Q99K46 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
Usp11Q99K46 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Usp11Q99K46 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Usp11Q99K46 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
Usp11Q99K46 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Usp11Q99K46 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Usp11Q99K46 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC19.65■□□□□ 0.74
Usp11Q99K46 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Usp11Q99K46 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC19.65■□□□□ 0.74
Usp11Q99K46 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Usp11Q99K46 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC19.65■□□□□ 0.74
Usp11Q99K46 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC19.65■□□□□ 0.74
Usp11Q99K46 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Usp11Q99K46 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Usp11Q99K46 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Usp11Q99K46 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.74
Usp11Q99K46 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.74
Usp11Q99K46 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Usp11Q99K46 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Usp11Q99K46 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
Usp11Q99K46 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Usp11Q99K46 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
Usp11Q99K46 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Usp11Q99K46 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
Usp11Q99K46 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
Usp11Q99K46 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
Usp11Q99K46 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
Usp11Q99K46 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Usp11Q99K46 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Usp11Q99K46 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Usp11Q99K46 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Usp11Q99K46 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Usp11Q99K46 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Usp11Q99K46 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC19.63■□□□□ 0.73
Usp11Q99K46 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Usp11Q99K46 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Usp11Q99K46 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC19.63■□□□□ 0.73
Usp11Q99K46 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC19.63■□□□□ 0.73
Usp11Q99K46 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Usp11Q99K46 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Usp11Q99K46 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Usp11Q99K46 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Usp11Q99K46 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Usp11Q99K46 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC19.63■□□□□ 0.73
Usp11Q99K46 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Usp11Q99K46 Gm43231-201ENSMUST00000202960 2258 ntBASIC19.63■□□□□ 0.73
Usp11Q99K46 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
Usp11Q99K46 Fam105a-203ENSMUST00000226170 3043 ntBASIC19.62■□□□□ 0.73
Usp11Q99K46 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Usp11Q99K46 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Usp11Q99K46 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
Usp11Q99K46 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Usp11Q99K46 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC19.62■□□□□ 0.73
Usp11Q99K46 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Usp11Q99K46 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Usp11Q99K46 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
Usp11Q99K46 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Usp11Q99K46 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Usp11Q99K46 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
Usp11Q99K46 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Usp11Q99K46 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Usp11Q99K46 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Usp11Q99K46 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC19.61■□□□□ 0.73
Usp11Q99K46 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Usp11Q99K46 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Usp11Q99K46 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC19.61■□□□□ 0.73
Usp11Q99K46 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Usp11Q99K46 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Usp11Q99K46 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Usp11Q99K46 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
Usp11Q99K46 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 18 ms