Protein–RNA interactions for Protein: Q99JP6

Homer3, Homer protein homolog 3, mousemouse

Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Homer3Q99JP6 Gm9207-201ENSMUST00000198773 1115 ntBASIC18.64■□□□□ 0.57
Homer3Q99JP6 Gm45102-201ENSMUST00000207427 857 ntBASIC18.64■□□□□ 0.57
Homer3Q99JP6 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
Homer3Q99JP6 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Homer3Q99JP6 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC18.64■□□□□ 0.57
Homer3Q99JP6 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Homer3Q99JP6 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Homer3Q99JP6 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Homer3Q99JP6 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Homer3Q99JP6 Gm5576-201ENSMUST00000075809 1236 ntBASIC18.63■□□□□ 0.57
Homer3Q99JP6 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Homer3Q99JP6 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Homer3Q99JP6 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
Homer3Q99JP6 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Homer3Q99JP6 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Homer3Q99JP6 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Homer3Q99JP6 Gm43213-201ENSMUST00000151866 1790 ntBASIC18.63■□□□□ 0.57
Homer3Q99JP6 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC18.63■□□□□ 0.57
Homer3Q99JP6 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
Homer3Q99JP6 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Homer3Q99JP6 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Homer3Q99JP6 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC18.62■□□□□ 0.57
Homer3Q99JP6 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Homer3Q99JP6 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
Homer3Q99JP6 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Homer3Q99JP6 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Homer3Q99JP6 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Homer3Q99JP6 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
Homer3Q99JP6 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Homer3Q99JP6 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Homer3Q99JP6 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Homer3Q99JP6 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Homer3Q99JP6 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Homer3Q99JP6 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Homer3Q99JP6 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
Homer3Q99JP6 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
Homer3Q99JP6 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Homer3Q99JP6 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Homer3Q99JP6 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC18.61■□□□□ 0.57
Homer3Q99JP6 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC18.61■□□□□ 0.57
Homer3Q99JP6 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Homer3Q99JP6 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Homer3Q99JP6 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC18.61■□□□□ 0.57
Homer3Q99JP6 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Homer3Q99JP6 Gm44832-201ENSMUST00000208849 2303 ntBASIC18.61■□□□□ 0.57
Homer3Q99JP6 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC18.61■□□□□ 0.57
Homer3Q99JP6 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Homer3Q99JP6 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Homer3Q99JP6 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Homer3Q99JP6 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
Homer3Q99JP6 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Homer3Q99JP6 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Homer3Q99JP6 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Homer3Q99JP6 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Homer3Q99JP6 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC18.6■□□□□ 0.57
Homer3Q99JP6 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Homer3Q99JP6 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Homer3Q99JP6 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC18.6■□□□□ 0.57
Homer3Q99JP6 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Homer3Q99JP6 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC18.6■□□□□ 0.57
Homer3Q99JP6 Gm42939-201ENSMUST00000197514 2205 ntBASIC18.59■□□□□ 0.57
Homer3Q99JP6 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
Homer3Q99JP6 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Homer3Q99JP6 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
Homer3Q99JP6 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC18.59■□□□□ 0.57
Homer3Q99JP6 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Homer3Q99JP6 Gm14117-201ENSMUST00000122417 843 ntBASIC18.59■□□□□ 0.57
Homer3Q99JP6 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Homer3Q99JP6 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Homer3Q99JP6 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC18.59■□□□□ 0.57
Homer3Q99JP6 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Homer3Q99JP6 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Homer3Q99JP6 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC18.59■□□□□ 0.57
Homer3Q99JP6 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Homer3Q99JP6 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.57
Homer3Q99JP6 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.57
Homer3Q99JP6 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.57
Homer3Q99JP6 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
Homer3Q99JP6 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Homer3Q99JP6 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Homer3Q99JP6 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Homer3Q99JP6 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC18.58■□□□□ 0.56
Homer3Q99JP6 Rps24-207ENSMUST00000224568 714 ntBASIC18.58■□□□□ 0.56
Homer3Q99JP6 Spcs1-204ENSMUST00000226782 949 ntBASIC18.58■□□□□ 0.56
Homer3Q99JP6 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Homer3Q99JP6 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
Homer3Q99JP6 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC18.58■□□□□ 0.56
Homer3Q99JP6 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Homer3Q99JP6 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
Homer3Q99JP6 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Homer3Q99JP6 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Homer3Q99JP6 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Homer3Q99JP6 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Homer3Q99JP6 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Homer3Q99JP6 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Homer3Q99JP6 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Homer3Q99JP6 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
Homer3Q99JP6 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
Homer3Q99JP6 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
Homer3Q99JP6 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 17.5 ms