Protein–RNA interactions for Protein: Q99J95

Cdk9, Cyclin-dependent kinase 9, mousemouse

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk9Q99J95 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Cdk9Q99J95 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
Cdk9Q99J95 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Cdk9Q99J95 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Cdk9Q99J95 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
Cdk9Q99J95 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Cdk9Q99J95 Gm6085-201ENSMUST00000182774 1470 ntBASIC18.85■□□□□ 0.61
Cdk9Q99J95 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Cdk9Q99J95 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Cdk9Q99J95 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Cdk9Q99J95 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Cdk9Q99J95 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC18.85■□□□□ 0.61
Cdk9Q99J95 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Cdk9Q99J95 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC18.85■□□□□ 0.61
Cdk9Q99J95 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Cdk9Q99J95 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
Cdk9Q99J95 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC18.85■□□□□ 0.61
Cdk9Q99J95 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Cdk9Q99J95 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Cdk9Q99J95 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Cdk9Q99J95 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Cdk9Q99J95 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
Cdk9Q99J95 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Cdk9Q99J95 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Cdk9Q99J95 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Cdk9Q99J95 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
Cdk9Q99J95 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Cdk9Q99J95 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Cdk9Q99J95 AC123834.2-201ENSMUST00000224038 2340 ntBASIC18.84■□□□□ 0.61
Cdk9Q99J95 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Cdk9Q99J95 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
Cdk9Q99J95 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Cdk9Q99J95 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
Cdk9Q99J95 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Cdk9Q99J95 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Cdk9Q99J95 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Cdk9Q99J95 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Cdk9Q99J95 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Cdk9Q99J95 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC18.83■□□□□ 0.61
Cdk9Q99J95 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Cdk9Q99J95 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Cdk9Q99J95 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Cdk9Q99J95 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
Cdk9Q99J95 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Cdk9Q99J95 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
Cdk9Q99J95 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Cdk9Q99J95 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Cdk9Q99J95 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Cdk9Q99J95 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
Cdk9Q99J95 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Cdk9Q99J95 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Cdk9Q99J95 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Cdk9Q99J95 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Cdk9Q99J95 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Cdk9Q99J95 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Cdk9Q99J95 AC154266.1-201ENSMUST00000223190 503 ntBASIC18.82■□□□□ 0.6
Cdk9Q99J95 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Cdk9Q99J95 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Cdk9Q99J95 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Cdk9Q99J95 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC18.82■□□□□ 0.6
Cdk9Q99J95 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Cdk9Q99J95 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC18.82■□□□□ 0.6
Cdk9Q99J95 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Cdk9Q99J95 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Cdk9Q99J95 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Cdk9Q99J95 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Cdk9Q99J95 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
Cdk9Q99J95 Gm15853-202ENSMUST00000195518 2041 ntBASIC18.81■□□□□ 0.6
Cdk9Q99J95 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Cdk9Q99J95 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC18.81■□□□□ 0.6
Cdk9Q99J95 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
Cdk9Q99J95 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Cdk9Q99J95 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Cdk9Q99J95 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
Cdk9Q99J95 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Cdk9Q99J95 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Cdk9Q99J95 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Cdk9Q99J95 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Cdk9Q99J95 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Cdk9Q99J95 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Cdk9Q99J95 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Cdk9Q99J95 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Cdk9Q99J95 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Cdk9Q99J95 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Cdk9Q99J95 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC18.8■□□□□ 0.6
Cdk9Q99J95 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Cdk9Q99J95 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC18.8■□□□□ 0.6
Cdk9Q99J95 Gm37352-201ENSMUST00000193908 2181 ntBASIC18.8■□□□□ 0.6
Cdk9Q99J95 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Cdk9Q99J95 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Cdk9Q99J95 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Cdk9Q99J95 AC122335.2-201ENSMUST00000213901 6181 ntBASIC18.8■□□□□ 0.6
Cdk9Q99J95 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Cdk9Q99J95 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
Cdk9Q99J95 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
Cdk9Q99J95 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC18.79■□□□□ 0.6
Cdk9Q99J95 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC18.79■□□□□ 0.6
Cdk9Q99J95 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
Cdk9Q99J95 Krt8-ps-201ENSMUST00000208495 945 ntBASIC18.79■□□□□ 0.6
Cdk9Q99J95 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 27.7 ms