Protein–RNA interactions for Protein: Q99J62

Rfc4, Replication factor C subunit 4, mousemouse

Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfc4Q99J62 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC21.67■■□□□ 1.06
Rfc4Q99J62 Gm32699-201ENSMUST00000221728 1988 ntBASIC21.67■■□□□ 1.06
Rfc4Q99J62 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC21.67■■□□□ 1.06
Rfc4Q99J62 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC21.66■■□□□ 1.06
Rfc4Q99J62 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC21.66■■□□□ 1.06
Rfc4Q99J62 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
Rfc4Q99J62 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Rfc4Q99J62 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC21.66■■□□□ 1.06
Rfc4Q99J62 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC21.66■■□□□ 1.06
Rfc4Q99J62 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Rfc4Q99J62 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Rfc4Q99J62 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC21.66■■□□□ 1.06
Rfc4Q99J62 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Rfc4Q99J62 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC21.66■■□□□ 1.06
Rfc4Q99J62 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Rfc4Q99J62 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Rfc4Q99J62 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Rfc4Q99J62 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Rfc4Q99J62 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Rfc4Q99J62 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC21.65■■□□□ 1.06
Rfc4Q99J62 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Rfc4Q99J62 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Rfc4Q99J62 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Rfc4Q99J62 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC21.65■■□□□ 1.06
Rfc4Q99J62 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Rfc4Q99J62 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Rfc4Q99J62 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Rfc4Q99J62 Krtap5-1-202ENSMUST00000188274 742 ntBASIC21.65■■□□□ 1.06
Rfc4Q99J62 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC21.65■■□□□ 1.06
Rfc4Q99J62 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Rfc4Q99J62 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Rfc4Q99J62 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Rfc4Q99J62 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Rfc4Q99J62 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
Rfc4Q99J62 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Rfc4Q99J62 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
Rfc4Q99J62 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
Rfc4Q99J62 Gm2399-201ENSMUST00000104944 225 ntBASIC21.64■■□□□ 1.05
Rfc4Q99J62 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC21.64■■□□□ 1.05
Rfc4Q99J62 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC21.64■■□□□ 1.05
Rfc4Q99J62 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Rfc4Q99J62 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC21.64■■□□□ 1.05
Rfc4Q99J62 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC21.64■■□□□ 1.05
Rfc4Q99J62 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Rfc4Q99J62 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Rfc4Q99J62 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC21.63■■□□□ 1.05
Rfc4Q99J62 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC21.63■■□□□ 1.05
Rfc4Q99J62 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Rfc4Q99J62 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Rfc4Q99J62 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Rfc4Q99J62 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Rfc4Q99J62 Gm10698-201ENSMUST00000182663 604 ntBASIC21.63■■□□□ 1.05
Rfc4Q99J62 Gm29994-201ENSMUST00000195495 1193 ntBASIC21.63■■□□□ 1.05
Rfc4Q99J62 AC153881.1-201ENSMUST00000214448 284 ntBASIC21.63■■□□□ 1.05
Rfc4Q99J62 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC21.62■■□□□ 1.05
Rfc4Q99J62 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Rfc4Q99J62 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Rfc4Q99J62 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC21.62■■□□□ 1.05
Rfc4Q99J62 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Rfc4Q99J62 Gm15378-201ENSMUST00000121894 207 ntBASIC21.62■■□□□ 1.05
Rfc4Q99J62 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Rfc4Q99J62 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Rfc4Q99J62 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Rfc4Q99J62 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Rfc4Q99J62 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Rfc4Q99J62 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC21.61■■□□□ 1.05
Rfc4Q99J62 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Rfc4Q99J62 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Rfc4Q99J62 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
Rfc4Q99J62 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Rfc4Q99J62 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC21.61■■□□□ 1.05
Rfc4Q99J62 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Rfc4Q99J62 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC21.61■■□□□ 1.05
Rfc4Q99J62 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC21.61■■□□□ 1.05
Rfc4Q99J62 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC21.61■■□□□ 1.05
Rfc4Q99J62 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC21.6■■□□□ 1.05
Rfc4Q99J62 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Rfc4Q99J62 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC21.6■■□□□ 1.05
Rfc4Q99J62 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Rfc4Q99J62 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC21.6■■□□□ 1.05
Rfc4Q99J62 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC21.6■■□□□ 1.05
Rfc4Q99J62 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC21.6■■□□□ 1.05
Rfc4Q99J62 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC21.6■■□□□ 1.05
Rfc4Q99J62 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Rfc4Q99J62 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Rfc4Q99J62 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC21.59■■□□□ 1.05
Rfc4Q99J62 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC21.59■■□□□ 1.05
Rfc4Q99J62 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC21.59■■□□□ 1.05
Rfc4Q99J62 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC21.59■■□□□ 1.05
Rfc4Q99J62 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Rfc4Q99J62 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC21.59■■□□□ 1.05
Rfc4Q99J62 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC21.59■■□□□ 1.05
Rfc4Q99J62 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC21.59■■□□□ 1.05
Rfc4Q99J62 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Rfc4Q99J62 Gm43672-201ENSMUST00000199072 1731 ntBASIC21.58■■□□□ 1.05
Rfc4Q99J62 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Rfc4Q99J62 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC21.58■■□□□ 1.05
Rfc4Q99J62 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Rfc4Q99J62 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC21.58■■□□□ 1.05
Rfc4Q99J62 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.05
Retrieved 100 of 76,532 protein–RNA pairs in 15.9 ms