Protein–RNA interactions for Protein: Q91Y11

Pcdha9, Protocadherin alpha-9, mousemouse

Predictions only

Length 979 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha9Q91Y11 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Pcdha9Q91Y11 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Pcdha9Q91Y11 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Pcdha9Q91Y11 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Pcdha9Q91Y11 Gm5784-201ENSMUST00000179344 2478 ntBASIC19.96■□□□□ 0.79
Pcdha9Q91Y11 AC131586.2-201ENSMUST00000228370 1512 ntBASIC19.96■□□□□ 0.79
Pcdha9Q91Y11 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Pcdha9Q91Y11 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Pcdha9Q91Y11 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Pcdha9Q91Y11 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Pcdha9Q91Y11 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC19.95■□□□□ 0.78
Pcdha9Q91Y11 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
Pcdha9Q91Y11 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Pcdha9Q91Y11 Nespas-201ENSMUST00000143738 1083 ntBASIC19.95■□□□□ 0.78
Pcdha9Q91Y11 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Pcdha9Q91Y11 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC19.95■□□□□ 0.78
Pcdha9Q91Y11 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC19.95■□□□□ 0.78
Pcdha9Q91Y11 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Pcdha9Q91Y11 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Pcdha9Q91Y11 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Pcdha9Q91Y11 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Pcdha9Q91Y11 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Pcdha9Q91Y11 Iqck-206ENSMUST00000208658 2891 ntBASIC19.94■□□□□ 0.78
Pcdha9Q91Y11 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC19.94■□□□□ 0.78
Pcdha9Q91Y11 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Pcdha9Q91Y11 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC19.94■□□□□ 0.78
Pcdha9Q91Y11 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC19.94■□□□□ 0.78
Pcdha9Q91Y11 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC19.94■□□□□ 0.78
Pcdha9Q91Y11 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Pcdha9Q91Y11 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Pcdha9Q91Y11 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Pcdha9Q91Y11 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC19.94■□□□□ 0.78
Pcdha9Q91Y11 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Pcdha9Q91Y11 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
Pcdha9Q91Y11 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Pcdha9Q91Y11 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Pcdha9Q91Y11 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
Pcdha9Q91Y11 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Pcdha9Q91Y11 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Pcdha9Q91Y11 Rncr4-201ENSMUST00000194541 2234 ntBASIC19.93■□□□□ 0.78
Pcdha9Q91Y11 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Pcdha9Q91Y11 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
Pcdha9Q91Y11 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC19.93■□□□□ 0.78
Pcdha9Q91Y11 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Pcdha9Q91Y11 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Pcdha9Q91Y11 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC19.93■□□□□ 0.78
Pcdha9Q91Y11 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC19.93■□□□□ 0.78
Pcdha9Q91Y11 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Pcdha9Q91Y11 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Pcdha9Q91Y11 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Pcdha9Q91Y11 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
Pcdha9Q91Y11 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
Pcdha9Q91Y11 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
Pcdha9Q91Y11 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Pcdha9Q91Y11 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Pcdha9Q91Y11 Gm7291-201ENSMUST00000199147 382 ntBASIC19.92■□□□□ 0.78
Pcdha9Q91Y11 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
Pcdha9Q91Y11 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Pcdha9Q91Y11 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
Pcdha9Q91Y11 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Pcdha9Q91Y11 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
Pcdha9Q91Y11 Gm10167-201ENSMUST00000150411 1479 ntBASIC19.92■□□□□ 0.78
Pcdha9Q91Y11 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Pcdha9Q91Y11 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Pcdha9Q91Y11 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Pcdha9Q91Y11 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
Pcdha9Q91Y11 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Pcdha9Q91Y11 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Pcdha9Q91Y11 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Pcdha9Q91Y11 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Pcdha9Q91Y11 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Pcdha9Q91Y11 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Pcdha9Q91Y11 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Pcdha9Q91Y11 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC19.9■□□□□ 0.78
Pcdha9Q91Y11 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC19.9■□□□□ 0.78
Pcdha9Q91Y11 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Pcdha9Q91Y11 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Pcdha9Q91Y11 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Pcdha9Q91Y11 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Pcdha9Q91Y11 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Pcdha9Q91Y11 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Pcdha9Q91Y11 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Pcdha9Q91Y11 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
Pcdha9Q91Y11 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Pcdha9Q91Y11 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Pcdha9Q91Y11 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Pcdha9Q91Y11 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Pcdha9Q91Y11 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Pcdha9Q91Y11 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC19.89■□□□□ 0.77
Pcdha9Q91Y11 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Pcdha9Q91Y11 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Pcdha9Q91Y11 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Pcdha9Q91Y11 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Pcdha9Q91Y11 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Pcdha9Q91Y11 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC19.89■□□□□ 0.77
Pcdha9Q91Y11 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC19.88■□□□□ 0.77
Pcdha9Q91Y11 Gm9885-202ENSMUST00000186234 2209 ntBASIC19.88■□□□□ 0.77
Pcdha9Q91Y11 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC19.88■□□□□ 0.77
Pcdha9Q91Y11 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Pcdha9Q91Y11 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Retrieved 100 of 76,532 protein–RNA pairs in 20.5 ms