Protein–RNA interactions for Protein: Q91XZ2

Pcdhb8, Protocadherin beta-8, mousemouse

Predictions only

Length 779 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb8Q91XZ2 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
Pcdhb8Q91XZ2 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
Pcdhb8Q91XZ2 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Pcdhb8Q91XZ2 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Pcdhb8Q91XZ2 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.51
Pcdhb8Q91XZ2 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Pcdhb8Q91XZ2 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.51
Pcdhb8Q91XZ2 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC18.27■□□□□ 0.51
Pcdhb8Q91XZ2 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
Pcdhb8Q91XZ2 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Pcdhb8Q91XZ2 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC18.26■□□□□ 0.51
Pcdhb8Q91XZ2 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Pcdhb8Q91XZ2 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Pcdhb8Q91XZ2 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Pcdhb8Q91XZ2 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Pcdhb8Q91XZ2 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Pcdhb8Q91XZ2 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Pcdhb8Q91XZ2 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Pcdhb8Q91XZ2 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Pcdhb8Q91XZ2 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
Pcdhb8Q91XZ2 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Pcdhb8Q91XZ2 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Pcdhb8Q91XZ2 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC18.26■□□□□ 0.51
Pcdhb8Q91XZ2 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Pcdhb8Q91XZ2 Gm9885-202ENSMUST00000186234 2209 ntBASIC18.26■□□□□ 0.51
Pcdhb8Q91XZ2 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Pcdhb8Q91XZ2 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
Pcdhb8Q91XZ2 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
Pcdhb8Q91XZ2 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Pcdhb8Q91XZ2 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Pcdhb8Q91XZ2 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Pcdhb8Q91XZ2 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
Pcdhb8Q91XZ2 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
Pcdhb8Q91XZ2 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Pcdhb8Q91XZ2 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Pcdhb8Q91XZ2 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC18.25■□□□□ 0.51
Pcdhb8Q91XZ2 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC18.25■□□□□ 0.51
Pcdhb8Q91XZ2 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
Pcdhb8Q91XZ2 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
Pcdhb8Q91XZ2 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Pcdhb8Q91XZ2 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Pcdhb8Q91XZ2 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Pcdhb8Q91XZ2 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Pcdhb8Q91XZ2 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
Pcdhb8Q91XZ2 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Pcdhb8Q91XZ2 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC18.24■□□□□ 0.51
Pcdhb8Q91XZ2 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC18.24■□□□□ 0.51
Pcdhb8Q91XZ2 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Pcdhb8Q91XZ2 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Pcdhb8Q91XZ2 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Pcdhb8Q91XZ2 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Pcdhb8Q91XZ2 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Pcdhb8Q91XZ2 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Pcdhb8Q91XZ2 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Pcdhb8Q91XZ2 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC18.24■□□□□ 0.51
Pcdhb8Q91XZ2 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Pcdhb8Q91XZ2 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
Pcdhb8Q91XZ2 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC18.24■□□□□ 0.51
Pcdhb8Q91XZ2 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Pcdhb8Q91XZ2 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Pcdhb8Q91XZ2 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Pcdhb8Q91XZ2 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Pcdhb8Q91XZ2 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
Pcdhb8Q91XZ2 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC18.23■□□□□ 0.51
Pcdhb8Q91XZ2 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Pcdhb8Q91XZ2 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC18.23■□□□□ 0.51
Pcdhb8Q91XZ2 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC18.23■□□□□ 0.51
Pcdhb8Q91XZ2 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Pcdhb8Q91XZ2 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Pcdhb8Q91XZ2 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Pcdhb8Q91XZ2 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
Pcdhb8Q91XZ2 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
Pcdhb8Q91XZ2 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Pcdhb8Q91XZ2 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Pcdhb8Q91XZ2 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Pcdhb8Q91XZ2 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Pcdhb8Q91XZ2 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Pcdhb8Q91XZ2 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC18.23■□□□□ 0.51
Pcdhb8Q91XZ2 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC18.23■□□□□ 0.51
Pcdhb8Q91XZ2 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Pcdhb8Q91XZ2 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC18.23■□□□□ 0.51
Pcdhb8Q91XZ2 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Pcdhb8Q91XZ2 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Pcdhb8Q91XZ2 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Pcdhb8Q91XZ2 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
Pcdhb8Q91XZ2 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Pcdhb8Q91XZ2 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
Pcdhb8Q91XZ2 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Pcdhb8Q91XZ2 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Pcdhb8Q91XZ2 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC18.22■□□□□ 0.51
Pcdhb8Q91XZ2 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Pcdhb8Q91XZ2 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
Pcdhb8Q91XZ2 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Pcdhb8Q91XZ2 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Pcdhb8Q91XZ2 Gm27032-201ENSMUST00000183124 1116 ntBASIC18.22■□□□□ 0.51
Pcdhb8Q91XZ2 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC18.22■□□□□ 0.51
Pcdhb8Q91XZ2 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC18.22■□□□□ 0.51
Pcdhb8Q91XZ2 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
Pcdhb8Q91XZ2 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC18.22■□□□□ 0.51
Pcdhb8Q91XZ2 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 36 ms