Protein–RNA interactions for Protein: Q91XW9

Pcdhgc5, MCG133388, isoform CRA_f, mousemouse

Predictions only

Length 944 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhgc5Q91XW9 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
Pcdhgc5Q91XW9 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Pcdhgc5Q91XW9 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC21.35■■□□□ 1.01
Pcdhgc5Q91XW9 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC21.34■■□□□ 1.01
Pcdhgc5Q91XW9 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Pcdhgc5Q91XW9 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC21.34■■□□□ 1.01
Pcdhgc5Q91XW9 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC21.34■■□□□ 1.01
Pcdhgc5Q91XW9 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC21.34■■□□□ 1.01
Pcdhgc5Q91XW9 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC21.34■■□□□ 1.01
Pcdhgc5Q91XW9 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Pcdhgc5Q91XW9 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Pcdhgc5Q91XW9 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Pcdhgc5Q91XW9 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC21.34■■□□□ 1.01
Pcdhgc5Q91XW9 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Pcdhgc5Q91XW9 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC21.34■■□□□ 1.01
Pcdhgc5Q91XW9 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Pcdhgc5Q91XW9 Gm6802-201ENSMUST00000167843 1983 ntBASIC21.34■■□□□ 1.01
Pcdhgc5Q91XW9 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC21.33■■□□□ 1.01
Pcdhgc5Q91XW9 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
Pcdhgc5Q91XW9 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC21.33■■□□□ 1.01
Pcdhgc5Q91XW9 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
Pcdhgc5Q91XW9 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC21.33■■□□□ 1.01
Pcdhgc5Q91XW9 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC21.33■■□□□ 1.01
Pcdhgc5Q91XW9 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Pcdhgc5Q91XW9 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC21.33■■□□□ 1
Pcdhgc5Q91XW9 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC21.33■■□□□ 1
Pcdhgc5Q91XW9 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Pcdhgc5Q91XW9 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC21.33■■□□□ 1
Pcdhgc5Q91XW9 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Pcdhgc5Q91XW9 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC21.32■■□□□ 1
Pcdhgc5Q91XW9 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC21.32■■□□□ 1
Pcdhgc5Q91XW9 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Pcdhgc5Q91XW9 Golph3-205ENSMUST00000228671 2842 ntBASIC21.32■■□□□ 1
Pcdhgc5Q91XW9 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC21.32■■□□□ 1
Pcdhgc5Q91XW9 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC21.32■■□□□ 1
Pcdhgc5Q91XW9 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Pcdhgc5Q91XW9 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Pcdhgc5Q91XW9 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Pcdhgc5Q91XW9 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC21.32■■□□□ 1
Pcdhgc5Q91XW9 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC21.31■■□□□ 1
Pcdhgc5Q91XW9 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC21.31■■□□□ 1
Pcdhgc5Q91XW9 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Pcdhgc5Q91XW9 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Pcdhgc5Q91XW9 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC21.31■■□□□ 1
Pcdhgc5Q91XW9 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Pcdhgc5Q91XW9 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Pcdhgc5Q91XW9 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Pcdhgc5Q91XW9 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Pcdhgc5Q91XW9 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Pcdhgc5Q91XW9 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Pcdhgc5Q91XW9 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC21.31■■□□□ 1
Pcdhgc5Q91XW9 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
Pcdhgc5Q91XW9 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC21.3■■□□□ 1
Pcdhgc5Q91XW9 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Pcdhgc5Q91XW9 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC21.3■■□□□ 1
Pcdhgc5Q91XW9 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC21.3■■□□□ 1
Pcdhgc5Q91XW9 AC135963.1-201ENSMUST00000211640 717 ntBASIC21.3■■□□□ 1
Pcdhgc5Q91XW9 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Pcdhgc5Q91XW9 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Pcdhgc5Q91XW9 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC21.3■■□□□ 1
Pcdhgc5Q91XW9 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC21.29■■□□□ 1
Pcdhgc5Q91XW9 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Pcdhgc5Q91XW9 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC21.29■■□□□ 1
Pcdhgc5Q91XW9 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Pcdhgc5Q91XW9 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
Pcdhgc5Q91XW9 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC21.29■■□□□ 1
Pcdhgc5Q91XW9 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC21.29■■□□□ 1
Pcdhgc5Q91XW9 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC21.29■■□□□ 1
Pcdhgc5Q91XW9 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC21.29■■□□□ 1
Pcdhgc5Q91XW9 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC21.29■■□□□ 1
Pcdhgc5Q91XW9 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC21.29■■□□□ 1
Pcdhgc5Q91XW9 Gm27275-201ENSMUST00000184318 272 ntBASIC21.29■■□□□ 1
Pcdhgc5Q91XW9 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Pcdhgc5Q91XW9 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC21.29■■□□□ 1
Pcdhgc5Q91XW9 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC21.28■■□□□ 1
Pcdhgc5Q91XW9 Cdkn3-203ENSMUST00000227149 1952 ntBASIC21.28■■□□□ 1
Pcdhgc5Q91XW9 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Pcdhgc5Q91XW9 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Pcdhgc5Q91XW9 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC21.28■■□□□ 1
Pcdhgc5Q91XW9 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Pcdhgc5Q91XW9 Gm26524-201ENSMUST00000192339 390 ntBASIC21.28■■□□□ 1
Pcdhgc5Q91XW9 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
Pcdhgc5Q91XW9 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Pcdhgc5Q91XW9 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
Pcdhgc5Q91XW9 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Pcdhgc5Q91XW9 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Pcdhgc5Q91XW9 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC21.28■■□□□ 1
Pcdhgc5Q91XW9 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Pcdhgc5Q91XW9 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC21.27■■□□□ 1
Pcdhgc5Q91XW9 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Pcdhgc5Q91XW9 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Pcdhgc5Q91XW9 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Pcdhgc5Q91XW9 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC21.27■□□□□ 0.99
Pcdhgc5Q91XW9 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC21.27■□□□□ 0.99
Pcdhgc5Q91XW9 Rarb-207ENSMUST00000225921 2756 ntBASIC21.26■□□□□ 0.99
Pcdhgc5Q91XW9 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Pcdhgc5Q91XW9 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Pcdhgc5Q91XW9 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Pcdhgc5Q91XW9 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Pcdhgc5Q91XW9 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Retrieved 100 of 76,532 protein–RNA pairs in 18.2 ms