Protein–RNA interactions for Protein: Q91V10

Vsx1, Visual system homeobox 1, mousemouse

Predictions only

Length 363 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vsx1Q91V10 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Vsx1Q91V10 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC18.56■□□□□ 0.56
Vsx1Q91V10 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Vsx1Q91V10 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Vsx1Q91V10 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC18.56■□□□□ 0.56
Vsx1Q91V10 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC18.56■□□□□ 0.56
Vsx1Q91V10 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Vsx1Q91V10 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Vsx1Q91V10 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC18.56■□□□□ 0.56
Vsx1Q91V10 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Vsx1Q91V10 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Vsx1Q91V10 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Vsx1Q91V10 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Vsx1Q91V10 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Vsx1Q91V10 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC18.55■□□□□ 0.56
Vsx1Q91V10 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Vsx1Q91V10 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Vsx1Q91V10 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Vsx1Q91V10 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Vsx1Q91V10 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
Vsx1Q91V10 Gm11249-201ENSMUST00000117071 859 ntBASIC18.55■□□□□ 0.56
Vsx1Q91V10 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Vsx1Q91V10 AC121577.1-201ENSMUST00000227302 707 ntBASIC18.55■□□□□ 0.56
Vsx1Q91V10 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Vsx1Q91V10 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC18.55■□□□□ 0.56
Vsx1Q91V10 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
Vsx1Q91V10 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Vsx1Q91V10 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
Vsx1Q91V10 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Vsx1Q91V10 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Vsx1Q91V10 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC18.54■□□□□ 0.56
Vsx1Q91V10 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC18.54■□□□□ 0.56
Vsx1Q91V10 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Vsx1Q91V10 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
Vsx1Q91V10 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
Vsx1Q91V10 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC18.54■□□□□ 0.56
Vsx1Q91V10 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC18.54■□□□□ 0.56
Vsx1Q91V10 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC18.54■□□□□ 0.56
Vsx1Q91V10 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC18.54■□□□□ 0.56
Vsx1Q91V10 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Vsx1Q91V10 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Vsx1Q91V10 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Vsx1Q91V10 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Vsx1Q91V10 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Vsx1Q91V10 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Vsx1Q91V10 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
Vsx1Q91V10 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
Vsx1Q91V10 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Vsx1Q91V10 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC18.53■□□□□ 0.56
Vsx1Q91V10 Gm37035-201ENSMUST00000194809 2148 ntBASIC18.53■□□□□ 0.56
Vsx1Q91V10 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Vsx1Q91V10 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Vsx1Q91V10 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Vsx1Q91V10 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Vsx1Q91V10 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Vsx1Q91V10 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Vsx1Q91V10 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
Vsx1Q91V10 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
Vsx1Q91V10 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Vsx1Q91V10 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Vsx1Q91V10 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
Vsx1Q91V10 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC18.52■□□□□ 0.56
Vsx1Q91V10 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
Vsx1Q91V10 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Vsx1Q91V10 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
Vsx1Q91V10 Nrn1-203ENSMUST00000223611 1443 ntBASIC18.52■□□□□ 0.56
Vsx1Q91V10 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Vsx1Q91V10 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Vsx1Q91V10 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
Vsx1Q91V10 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
Vsx1Q91V10 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC18.52■□□□□ 0.56
Vsx1Q91V10 AC153881.2-201ENSMUST00000214877 204 ntBASIC18.52■□□□□ 0.56
Vsx1Q91V10 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Vsx1Q91V10 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Vsx1Q91V10 AA386476-201ENSMUST00000098781 1665 ntBASIC18.52■□□□□ 0.56
Vsx1Q91V10 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Vsx1Q91V10 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Vsx1Q91V10 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC18.52■□□□□ 0.55
Vsx1Q91V10 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Vsx1Q91V10 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
Vsx1Q91V10 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Vsx1Q91V10 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC18.51■□□□□ 0.55
Vsx1Q91V10 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Vsx1Q91V10 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Vsx1Q91V10 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Vsx1Q91V10 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Vsx1Q91V10 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC18.51■□□□□ 0.55
Vsx1Q91V10 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Vsx1Q91V10 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Vsx1Q91V10 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC18.5■□□□□ 0.55
Vsx1Q91V10 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Vsx1Q91V10 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Vsx1Q91V10 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Vsx1Q91V10 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Vsx1Q91V10 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC18.5■□□□□ 0.55
Vsx1Q91V10 Gm18666-201ENSMUST00000190039 958 ntBASIC18.5■□□□□ 0.55
Vsx1Q91V10 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Vsx1Q91V10 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Vsx1Q91V10 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Vsx1Q91V10 Gm43909-201ENSMUST00000203443 1876 ntBASIC18.5■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 30.8 ms