Protein–RNA interactions for Protein: Q8VIM6

Strc, Stereocilin, mousemouse

Predictions only

Length 1,809 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
StrcQ8VIM6 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
StrcQ8VIM6 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC22.78■■□□□ 1.24
StrcQ8VIM6 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
StrcQ8VIM6 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC22.78■■□□□ 1.24
StrcQ8VIM6 Gm10517-202ENSMUST00000192970 758 ntBASIC22.78■■□□□ 1.24
StrcQ8VIM6 Gm43183-201ENSMUST00000200632 547 ntBASIC22.78■■□□□ 1.24
StrcQ8VIM6 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC22.78■■□□□ 1.24
StrcQ8VIM6 Zfp783-201ENSMUST00000095946 670 ntBASIC22.78■■□□□ 1.24
StrcQ8VIM6 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
StrcQ8VIM6 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC22.77■■□□□ 1.24
StrcQ8VIM6 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC22.77■■□□□ 1.24
StrcQ8VIM6 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC22.77■■□□□ 1.24
StrcQ8VIM6 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC22.77■■□□□ 1.24
StrcQ8VIM6 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC22.77■■□□□ 1.24
StrcQ8VIM6 Gm17641-201ENSMUST00000166328 2350 ntBASIC22.76■■□□□ 1.23
StrcQ8VIM6 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
StrcQ8VIM6 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC22.75■■□□□ 1.23
StrcQ8VIM6 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC22.75■■□□□ 1.23
StrcQ8VIM6 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC22.75■■□□□ 1.23
StrcQ8VIM6 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC22.75■■□□□ 1.23
StrcQ8VIM6 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC22.75■■□□□ 1.23
StrcQ8VIM6 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC22.75■■□□□ 1.23
StrcQ8VIM6 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC22.75■■□□□ 1.23
StrcQ8VIM6 Gm45560-201ENSMUST00000211492 1472 ntBASIC22.75■■□□□ 1.23
StrcQ8VIM6 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC22.75■■□□□ 1.23
StrcQ8VIM6 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC22.75■■□□□ 1.23
StrcQ8VIM6 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC22.75■■□□□ 1.23
StrcQ8VIM6 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
StrcQ8VIM6 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC22.75■■□□□ 1.23
StrcQ8VIM6 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC22.74■■□□□ 1.23
StrcQ8VIM6 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
StrcQ8VIM6 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
StrcQ8VIM6 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
StrcQ8VIM6 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
StrcQ8VIM6 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
StrcQ8VIM6 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
StrcQ8VIM6 Timm23-208ENSMUST00000226683 750 ntBASIC22.74■■□□□ 1.23
StrcQ8VIM6 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC22.74■■□□□ 1.23
StrcQ8VIM6 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC22.74■■□□□ 1.23
StrcQ8VIM6 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
StrcQ8VIM6 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC22.73■■□□□ 1.23
StrcQ8VIM6 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
StrcQ8VIM6 Odf3b-204ENSMUST00000227834 930 ntBASIC22.73■■□□□ 1.23
StrcQ8VIM6 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
StrcQ8VIM6 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
StrcQ8VIM6 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
StrcQ8VIM6 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
StrcQ8VIM6 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
StrcQ8VIM6 Gm37292-201ENSMUST00000192062 758 ntBASIC22.73■■□□□ 1.23
StrcQ8VIM6 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC22.73■■□□□ 1.23
StrcQ8VIM6 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC22.73■■□□□ 1.23
StrcQ8VIM6 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
StrcQ8VIM6 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
StrcQ8VIM6 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
StrcQ8VIM6 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
StrcQ8VIM6 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
StrcQ8VIM6 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
StrcQ8VIM6 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
StrcQ8VIM6 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
StrcQ8VIM6 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
StrcQ8VIM6 Gm12382-201ENSMUST00000122005 922 ntBASIC22.71■■□□□ 1.23
StrcQ8VIM6 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC22.71■■□□□ 1.23
StrcQ8VIM6 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
StrcQ8VIM6 Gm5540-201ENSMUST00000131852 1848 ntBASIC22.71■■□□□ 1.23
StrcQ8VIM6 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
StrcQ8VIM6 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
StrcQ8VIM6 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
StrcQ8VIM6 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC22.71■■□□□ 1.23
StrcQ8VIM6 Gm15375-201ENSMUST00000119510 849 ntBASIC22.71■■□□□ 1.23
StrcQ8VIM6 Gm42545-201ENSMUST00000202755 922 ntBASIC22.71■■□□□ 1.23
StrcQ8VIM6 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
StrcQ8VIM6 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.23
StrcQ8VIM6 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC22.7■■□□□ 1.22
StrcQ8VIM6 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC22.7■■□□□ 1.22
StrcQ8VIM6 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
StrcQ8VIM6 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
StrcQ8VIM6 Gm18032-201ENSMUST00000222541 538 ntBASIC22.7■■□□□ 1.22
StrcQ8VIM6 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC22.7■■□□□ 1.22
StrcQ8VIM6 Gm37352-201ENSMUST00000193908 2181 ntBASIC22.69■■□□□ 1.22
StrcQ8VIM6 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
StrcQ8VIM6 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
StrcQ8VIM6 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
StrcQ8VIM6 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
StrcQ8VIM6 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
StrcQ8VIM6 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
StrcQ8VIM6 AC156016.1-201ENSMUST00000227190 1035 ntBASIC22.68■■□□□ 1.22
StrcQ8VIM6 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
StrcQ8VIM6 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
StrcQ8VIM6 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
StrcQ8VIM6 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC22.68■■□□□ 1.22
StrcQ8VIM6 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
StrcQ8VIM6 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC22.68■■□□□ 1.22
StrcQ8VIM6 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
StrcQ8VIM6 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
StrcQ8VIM6 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC22.68■■□□□ 1.22
StrcQ8VIM6 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
StrcQ8VIM6 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC22.67■■□□□ 1.22
StrcQ8VIM6 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
StrcQ8VIM6 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
StrcQ8VIM6 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Retrieved 100 of 76,532 protein–RNA pairs in 21.7 ms