Protein–RNA interactions for Protein: Q8VHQ4

Rab40c, Ras-related protein Rab-40C, mousemouse

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab40cQ8VHQ4 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
Rab40cQ8VHQ4 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
Rab40cQ8VHQ4 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC15.33■□□□□ 0.04
Rab40cQ8VHQ4 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Rab40cQ8VHQ4 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rab40cQ8VHQ4 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
Rab40cQ8VHQ4 Gm42911-201ENSMUST00000199360 1630 ntBASIC15.32■□□□□ 0.04
Rab40cQ8VHQ4 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rab40cQ8VHQ4 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Rab40cQ8VHQ4 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rab40cQ8VHQ4 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rab40cQ8VHQ4 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rab40cQ8VHQ4 Gm43759-201ENSMUST00000196925 1261 ntBASIC15.32■□□□□ 0.04
Rab40cQ8VHQ4 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
Rab40cQ8VHQ4 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rab40cQ8VHQ4 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rab40cQ8VHQ4 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rab40cQ8VHQ4 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rab40cQ8VHQ4 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rab40cQ8VHQ4 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC15.32■□□□□ 0.04
Rab40cQ8VHQ4 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rab40cQ8VHQ4 AC123834.2-201ENSMUST00000224038 2340 ntBASIC15.32■□□□□ 0.04
Rab40cQ8VHQ4 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rab40cQ8VHQ4 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rab40cQ8VHQ4 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rab40cQ8VHQ4 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC15.31■□□□□ 0.04
Rab40cQ8VHQ4 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rab40cQ8VHQ4 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rab40cQ8VHQ4 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC15.31■□□□□ 0.04
Rab40cQ8VHQ4 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC15.31■□□□□ 0.04
Rab40cQ8VHQ4 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rab40cQ8VHQ4 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rab40cQ8VHQ4 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rab40cQ8VHQ4 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rab40cQ8VHQ4 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rab40cQ8VHQ4 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Rab40cQ8VHQ4 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rab40cQ8VHQ4 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Rab40cQ8VHQ4 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Rab40cQ8VHQ4 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Rab40cQ8VHQ4 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Rab40cQ8VHQ4 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Rab40cQ8VHQ4 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC15.3■□□□□ 0.04
Rab40cQ8VHQ4 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Rab40cQ8VHQ4 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Rab40cQ8VHQ4 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Rab40cQ8VHQ4 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Rab40cQ8VHQ4 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Rab40cQ8VHQ4 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Rab40cQ8VHQ4 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rab40cQ8VHQ4 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rab40cQ8VHQ4 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC15.29■□□□□ 0.04
Rab40cQ8VHQ4 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Rab40cQ8VHQ4 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rab40cQ8VHQ4 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
Rab40cQ8VHQ4 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC15.29■□□□□ 0.04
Rab40cQ8VHQ4 AC093043.1-201ENSMUST00000226700 898 ntBASIC15.29■□□□□ 0.04
Rab40cQ8VHQ4 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rab40cQ8VHQ4 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
Rab40cQ8VHQ4 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Rab40cQ8VHQ4 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rab40cQ8VHQ4 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rab40cQ8VHQ4 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rab40cQ8VHQ4 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rab40cQ8VHQ4 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rab40cQ8VHQ4 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC15.28■□□□□ 0.04
Rab40cQ8VHQ4 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Rab40cQ8VHQ4 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rab40cQ8VHQ4 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rab40cQ8VHQ4 Gm8770-201ENSMUST00000121113 1109 ntBASIC15.28■□□□□ 0.04
Rab40cQ8VHQ4 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC15.28■□□□□ 0.04
Rab40cQ8VHQ4 Gm7417-201ENSMUST00000192950 473 ntBASIC15.28■□□□□ 0.04
Rab40cQ8VHQ4 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC15.28■□□□□ 0.04
Rab40cQ8VHQ4 Serp2-204ENSMUST00000228055 705 ntBASIC15.28■□□□□ 0.04
Rab40cQ8VHQ4 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rab40cQ8VHQ4 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rab40cQ8VHQ4 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rab40cQ8VHQ4 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rab40cQ8VHQ4 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rab40cQ8VHQ4 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rab40cQ8VHQ4 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
Rab40cQ8VHQ4 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Rab40cQ8VHQ4 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
Rab40cQ8VHQ4 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Rab40cQ8VHQ4 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Rab40cQ8VHQ4 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Rab40cQ8VHQ4 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC15.27■□□□□ 0.03
Rab40cQ8VHQ4 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC15.27■□□□□ 0.03
Rab40cQ8VHQ4 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Rab40cQ8VHQ4 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC15.27■□□□□ 0.03
Rab40cQ8VHQ4 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rab40cQ8VHQ4 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rab40cQ8VHQ4 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rab40cQ8VHQ4 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rab40cQ8VHQ4 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Rab40cQ8VHQ4 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rab40cQ8VHQ4 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rab40cQ8VHQ4 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Rab40cQ8VHQ4 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Rab40cQ8VHQ4 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 41.4 ms