Protein–RNA interactions for Protein: Q8VCE1

Dnajc28, DnaJ homolog subfamily C member 28, mousemouse

Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Dnajc28Q8VCE1 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
Dnajc28Q8VCE1 Gm38342-201ENSMUST00000195710 2980 ntBASIC20.4■□□□□ 0.86
Dnajc28Q8VCE1 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Dnajc28Q8VCE1 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC20.4■□□□□ 0.86
Dnajc28Q8VCE1 Gm20049-201ENSMUST00000219950 730 ntBASIC20.4■□□□□ 0.86
Dnajc28Q8VCE1 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Dnajc28Q8VCE1 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Dnajc28Q8VCE1 Gm6802-201ENSMUST00000167843 1983 ntBASIC20.39■□□□□ 0.86
Dnajc28Q8VCE1 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC20.39■□□□□ 0.85
Dnajc28Q8VCE1 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.85
Dnajc28Q8VCE1 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC20.39■□□□□ 0.85
Dnajc28Q8VCE1 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
Dnajc28Q8VCE1 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
Dnajc28Q8VCE1 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC20.39■□□□□ 0.85
Dnajc28Q8VCE1 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Dnajc28Q8VCE1 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Dnajc28Q8VCE1 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Dnajc28Q8VCE1 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Dnajc28Q8VCE1 Golph3-205ENSMUST00000228671 2842 ntBASIC20.39■□□□□ 0.85
Dnajc28Q8VCE1 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Dnajc28Q8VCE1 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Dnajc28Q8VCE1 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Dnajc28Q8VCE1 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Dnajc28Q8VCE1 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Dnajc28Q8VCE1 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Dnajc28Q8VCE1 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Dnajc28Q8VCE1 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC20.38■□□□□ 0.85
Dnajc28Q8VCE1 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC20.38■□□□□ 0.85
Dnajc28Q8VCE1 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Dnajc28Q8VCE1 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
Dnajc28Q8VCE1 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Dnajc28Q8VCE1 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Dnajc28Q8VCE1 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Dnajc28Q8VCE1 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
Dnajc28Q8VCE1 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Dnajc28Q8VCE1 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC20.37■□□□□ 0.85
Dnajc28Q8VCE1 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC20.37■□□□□ 0.85
Dnajc28Q8VCE1 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC20.37■□□□□ 0.85
Dnajc28Q8VCE1 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC20.37■□□□□ 0.85
Dnajc28Q8VCE1 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC20.37■□□□□ 0.85
Dnajc28Q8VCE1 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC20.37■□□□□ 0.85
Dnajc28Q8VCE1 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC20.37■□□□□ 0.85
Dnajc28Q8VCE1 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Dnajc28Q8VCE1 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Dnajc28Q8VCE1 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Dnajc28Q8VCE1 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC20.37■□□□□ 0.85
Dnajc28Q8VCE1 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Dnajc28Q8VCE1 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Dnajc28Q8VCE1 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC20.36■□□□□ 0.85
Dnajc28Q8VCE1 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Dnajc28Q8VCE1 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Dnajc28Q8VCE1 Gm13168-201ENSMUST00000121771 632 ntBASIC20.36■□□□□ 0.85
Dnajc28Q8VCE1 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC20.36■□□□□ 0.85
Dnajc28Q8VCE1 Gm44672-201ENSMUST00000206944 1098 ntBASIC20.36■□□□□ 0.85
Dnajc28Q8VCE1 AC135637.1-201ENSMUST00000227750 365 ntBASIC20.36■□□□□ 0.85
Dnajc28Q8VCE1 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Dnajc28Q8VCE1 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Dnajc28Q8VCE1 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC20.36■□□□□ 0.85
Dnajc28Q8VCE1 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Dnajc28Q8VCE1 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC20.36■□□□□ 0.85
Dnajc28Q8VCE1 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Dnajc28Q8VCE1 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Dnajc28Q8VCE1 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC20.35■□□□□ 0.85
Dnajc28Q8VCE1 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Dnajc28Q8VCE1 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC20.35■□□□□ 0.85
Dnajc28Q8VCE1 AC122769.4-201ENSMUST00000228166 901 ntBASIC20.35■□□□□ 0.85
Dnajc28Q8VCE1 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Dnajc28Q8VCE1 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Dnajc28Q8VCE1 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
Dnajc28Q8VCE1 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Dnajc28Q8VCE1 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Dnajc28Q8VCE1 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Dnajc28Q8VCE1 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
Dnajc28Q8VCE1 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
Dnajc28Q8VCE1 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC20.34■□□□□ 0.85
Dnajc28Q8VCE1 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
Dnajc28Q8VCE1 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC20.34■□□□□ 0.85
Dnajc28Q8VCE1 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Dnajc28Q8VCE1 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC20.34■□□□□ 0.85
Dnajc28Q8VCE1 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC20.34■□□□□ 0.85
Dnajc28Q8VCE1 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Dnajc28Q8VCE1 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Dnajc28Q8VCE1 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Dnajc28Q8VCE1 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
Dnajc28Q8VCE1 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Dnajc28Q8VCE1 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
Dnajc28Q8VCE1 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Dnajc28Q8VCE1 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC20.33■□□□□ 0.85
Dnajc28Q8VCE1 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC20.33■□□□□ 0.85
Dnajc28Q8VCE1 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Dnajc28Q8VCE1 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC20.33■□□□□ 0.85
Dnajc28Q8VCE1 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Dnajc28Q8VCE1 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC20.33■□□□□ 0.84
Dnajc28Q8VCE1 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.84
Dnajc28Q8VCE1 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
Dnajc28Q8VCE1 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Dnajc28Q8VCE1 AC131586.2-201ENSMUST00000228370 1512 ntBASIC20.32■□□□□ 0.84
Dnajc28Q8VCE1 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Dnajc28Q8VCE1 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Dnajc28Q8VCE1 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Retrieved 100 of 76,532 protein–RNA pairs in 27.7 ms