Protein–RNA interactions for Protein: Q8VC56

Rnf8, E3 ubiquitin-protein ligase RNF8, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf8Q8VC56 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Rnf8Q8VC56 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Rnf8Q8VC56 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC18■□□□□ 0.47
Rnf8Q8VC56 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC18■□□□□ 0.47
Rnf8Q8VC56 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Rnf8Q8VC56 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
Rnf8Q8VC56 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Rnf8Q8VC56 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
Rnf8Q8VC56 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Rnf8Q8VC56 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Rnf8Q8VC56 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Rnf8Q8VC56 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
Rnf8Q8VC56 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC18■□□□□ 0.47
Rnf8Q8VC56 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Rnf8Q8VC56 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC18■□□□□ 0.47
Rnf8Q8VC56 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Rnf8Q8VC56 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Rnf8Q8VC56 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC18■□□□□ 0.47
Rnf8Q8VC56 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Rnf8Q8VC56 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Rnf8Q8VC56 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC18■□□□□ 0.47
Rnf8Q8VC56 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Rnf8Q8VC56 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
Rnf8Q8VC56 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Rnf8Q8VC56 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Rnf8Q8VC56 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
Rnf8Q8VC56 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
Rnf8Q8VC56 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Rnf8Q8VC56 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Rnf8Q8VC56 Gm38342-201ENSMUST00000195710 2980 ntBASIC17.99■□□□□ 0.47
Rnf8Q8VC56 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Rnf8Q8VC56 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
Rnf8Q8VC56 Gm11421-201ENSMUST00000122124 294 ntBASIC17.99■□□□□ 0.47
Rnf8Q8VC56 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Rnf8Q8VC56 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC17.99■□□□□ 0.47
Rnf8Q8VC56 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC17.99■□□□□ 0.47
Rnf8Q8VC56 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC17.99■□□□□ 0.47
Rnf8Q8VC56 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Rnf8Q8VC56 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
Rnf8Q8VC56 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Rnf8Q8VC56 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Rnf8Q8VC56 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Rnf8Q8VC56 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Rnf8Q8VC56 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Rnf8Q8VC56 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Rnf8Q8VC56 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Rnf8Q8VC56 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Rnf8Q8VC56 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Rnf8Q8VC56 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC17.98■□□□□ 0.47
Rnf8Q8VC56 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Rnf8Q8VC56 Gm43060-201ENSMUST00000200621 289 ntBASIC17.98■□□□□ 0.47
Rnf8Q8VC56 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
Rnf8Q8VC56 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Rnf8Q8VC56 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Rnf8Q8VC56 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Rnf8Q8VC56 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC17.98■□□□□ 0.47
Rnf8Q8VC56 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Rnf8Q8VC56 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC17.98■□□□□ 0.47
Rnf8Q8VC56 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
Rnf8Q8VC56 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
Rnf8Q8VC56 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC17.98■□□□□ 0.47
Rnf8Q8VC56 Gm42911-201ENSMUST00000199360 1630 ntBASIC17.98■□□□□ 0.47
Rnf8Q8VC56 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Rnf8Q8VC56 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
Rnf8Q8VC56 Gm45640-201ENSMUST00000210665 1896 ntBASIC17.97■□□□□ 0.47
Rnf8Q8VC56 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
Rnf8Q8VC56 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Rnf8Q8VC56 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Rnf8Q8VC56 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Rnf8Q8VC56 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
Rnf8Q8VC56 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Rnf8Q8VC56 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
Rnf8Q8VC56 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Rnf8Q8VC56 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Rnf8Q8VC56 Gm5540-201ENSMUST00000131852 1848 ntBASIC17.97■□□□□ 0.47
Rnf8Q8VC56 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Rnf8Q8VC56 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
Rnf8Q8VC56 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
Rnf8Q8VC56 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Rnf8Q8VC56 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Rnf8Q8VC56 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Rnf8Q8VC56 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Rnf8Q8VC56 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
Rnf8Q8VC56 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
Rnf8Q8VC56 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Rnf8Q8VC56 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Rnf8Q8VC56 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Rnf8Q8VC56 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Rnf8Q8VC56 Gm6627-201ENSMUST00000218299 2386 ntBASIC17.96■□□□□ 0.47
Rnf8Q8VC56 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Rnf8Q8VC56 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Rnf8Q8VC56 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Rnf8Q8VC56 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
Rnf8Q8VC56 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Rnf8Q8VC56 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC17.96■□□□□ 0.47
Rnf8Q8VC56 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Rnf8Q8VC56 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
Rnf8Q8VC56 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC17.96■□□□□ 0.47
Rnf8Q8VC56 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Rnf8Q8VC56 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 32.1 ms