Protein–RNA interactions for Protein: Q8R5L3

Vps39, Vam6/Vps39-like protein, mousemouse

Predictions only

Length 886 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps39Q8R5L3 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Vps39Q8R5L3 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
Vps39Q8R5L3 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Vps39Q8R5L3 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC18.78■□□□□ 0.6
Vps39Q8R5L3 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC18.78■□□□□ 0.6
Vps39Q8R5L3 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Vps39Q8R5L3 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
Vps39Q8R5L3 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Vps39Q8R5L3 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
Vps39Q8R5L3 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
Vps39Q8R5L3 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Vps39Q8R5L3 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Vps39Q8R5L3 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Vps39Q8R5L3 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Vps39Q8R5L3 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
Vps39Q8R5L3 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Vps39Q8R5L3 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Vps39Q8R5L3 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Vps39Q8R5L3 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Vps39Q8R5L3 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Vps39Q8R5L3 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Vps39Q8R5L3 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Vps39Q8R5L3 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Vps39Q8R5L3 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Vps39Q8R5L3 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Vps39Q8R5L3 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Vps39Q8R5L3 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Vps39Q8R5L3 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Vps39Q8R5L3 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
Vps39Q8R5L3 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Vps39Q8R5L3 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
Vps39Q8R5L3 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Vps39Q8R5L3 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Vps39Q8R5L3 Gm9885-202ENSMUST00000186234 2209 ntBASIC18.76■□□□□ 0.59
Vps39Q8R5L3 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC18.76■□□□□ 0.59
Vps39Q8R5L3 CT030146.1-201ENSMUST00000220919 217 ntBASIC18.76■□□□□ 0.59
Vps39Q8R5L3 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Vps39Q8R5L3 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Vps39Q8R5L3 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Vps39Q8R5L3 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
Vps39Q8R5L3 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Vps39Q8R5L3 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC18.76■□□□□ 0.59
Vps39Q8R5L3 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Vps39Q8R5L3 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
Vps39Q8R5L3 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
Vps39Q8R5L3 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Vps39Q8R5L3 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
Vps39Q8R5L3 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
Vps39Q8R5L3 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Vps39Q8R5L3 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Vps39Q8R5L3 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Vps39Q8R5L3 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Vps39Q8R5L3 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Vps39Q8R5L3 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Vps39Q8R5L3 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Vps39Q8R5L3 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
Vps39Q8R5L3 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Vps39Q8R5L3 Gm40848-201ENSMUST00000221998 324 ntBASIC18.75■□□□□ 0.59
Vps39Q8R5L3 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Vps39Q8R5L3 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Vps39Q8R5L3 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC18.75■□□□□ 0.59
Vps39Q8R5L3 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Vps39Q8R5L3 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Vps39Q8R5L3 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Vps39Q8R5L3 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC18.74■□□□□ 0.59
Vps39Q8R5L3 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Vps39Q8R5L3 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
Vps39Q8R5L3 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC18.74■□□□□ 0.59
Vps39Q8R5L3 Gm43017-201ENSMUST00000198296 752 ntBASIC18.74■□□□□ 0.59
Vps39Q8R5L3 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Vps39Q8R5L3 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Vps39Q8R5L3 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
Vps39Q8R5L3 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
Vps39Q8R5L3 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Vps39Q8R5L3 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Vps39Q8R5L3 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Vps39Q8R5L3 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Vps39Q8R5L3 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC18.74■□□□□ 0.59
Vps39Q8R5L3 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Vps39Q8R5L3 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
Vps39Q8R5L3 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Vps39Q8R5L3 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
Vps39Q8R5L3 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
Vps39Q8R5L3 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Vps39Q8R5L3 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Vps39Q8R5L3 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC18.73■□□□□ 0.59
Vps39Q8R5L3 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC18.73■□□□□ 0.59
Vps39Q8R5L3 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
Vps39Q8R5L3 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC18.73■□□□□ 0.59
Vps39Q8R5L3 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Vps39Q8R5L3 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
Vps39Q8R5L3 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
Vps39Q8R5L3 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Vps39Q8R5L3 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Vps39Q8R5L3 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Vps39Q8R5L3 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
Vps39Q8R5L3 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC18.72■□□□□ 0.59
Vps39Q8R5L3 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
Vps39Q8R5L3 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC18.72■□□□□ 0.59
Vps39Q8R5L3 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 32 ms