Protein–RNA interactions for Protein: Q8R4I1

Atxn7, Ataxin-7, mousemouse

Predictions only

Length 867 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atxn7Q8R4I1 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Atxn7Q8R4I1 Gm10698-201ENSMUST00000182663 604 ntBASIC21.79■■□□□ 1.08
Atxn7Q8R4I1 Gm29241-201ENSMUST00000189260 1096 ntBASIC21.79■■□□□ 1.08
Atxn7Q8R4I1 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Atxn7Q8R4I1 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC21.79■■□□□ 1.08
Atxn7Q8R4I1 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC21.79■■□□□ 1.08
Atxn7Q8R4I1 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Atxn7Q8R4I1 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Atxn7Q8R4I1 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
Atxn7Q8R4I1 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Atxn7Q8R4I1 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC21.79■■□□□ 1.08
Atxn7Q8R4I1 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Atxn7Q8R4I1 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC21.78■■□□□ 1.08
Atxn7Q8R4I1 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC21.78■■□□□ 1.08
Atxn7Q8R4I1 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Atxn7Q8R4I1 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Atxn7Q8R4I1 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC21.78■■□□□ 1.08
Atxn7Q8R4I1 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Atxn7Q8R4I1 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC21.78■■□□□ 1.08
Atxn7Q8R4I1 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC21.78■■□□□ 1.08
Atxn7Q8R4I1 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Atxn7Q8R4I1 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC21.78■■□□□ 1.08
Atxn7Q8R4I1 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Atxn7Q8R4I1 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Atxn7Q8R4I1 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Atxn7Q8R4I1 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Atxn7Q8R4I1 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Atxn7Q8R4I1 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC21.78■■□□□ 1.08
Atxn7Q8R4I1 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Atxn7Q8R4I1 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Atxn7Q8R4I1 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC21.77■■□□□ 1.08
Atxn7Q8R4I1 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC21.77■■□□□ 1.08
Atxn7Q8R4I1 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Atxn7Q8R4I1 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
Atxn7Q8R4I1 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.08
Atxn7Q8R4I1 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC21.77■■□□□ 1.08
Atxn7Q8R4I1 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
Atxn7Q8R4I1 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC21.77■■□□□ 1.08
Atxn7Q8R4I1 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
Atxn7Q8R4I1 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Atxn7Q8R4I1 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC21.77■■□□□ 1.07
Atxn7Q8R4I1 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC21.77■■□□□ 1.07
Atxn7Q8R4I1 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
Atxn7Q8R4I1 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Atxn7Q8R4I1 AC158538.1-201ENSMUST00000225870 294 ntBASIC21.76■■□□□ 1.07
Atxn7Q8R4I1 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Atxn7Q8R4I1 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Atxn7Q8R4I1 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC21.76■■□□□ 1.07
Atxn7Q8R4I1 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC21.76■■□□□ 1.07
Atxn7Q8R4I1 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC21.76■■□□□ 1.07
Atxn7Q8R4I1 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Atxn7Q8R4I1 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
Atxn7Q8R4I1 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Atxn7Q8R4I1 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Atxn7Q8R4I1 Nrn1-203ENSMUST00000223611 1443 ntBASIC21.75■■□□□ 1.07
Atxn7Q8R4I1 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Atxn7Q8R4I1 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC21.75■■□□□ 1.07
Atxn7Q8R4I1 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Atxn7Q8R4I1 AC160393.1-201ENSMUST00000218378 1279 ntBASIC21.75■■□□□ 1.07
Atxn7Q8R4I1 AC140264.2-202ENSMUST00000218746 817 ntBASIC21.75■■□□□ 1.07
Atxn7Q8R4I1 Arhgef33-211ENSMUST00000225658 473 ntBASIC21.75■■□□□ 1.07
Atxn7Q8R4I1 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC21.75■■□□□ 1.07
Atxn7Q8R4I1 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Atxn7Q8R4I1 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC21.75■■□□□ 1.07
Atxn7Q8R4I1 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Atxn7Q8R4I1 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC21.74■■□□□ 1.07
Atxn7Q8R4I1 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Atxn7Q8R4I1 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC21.74■■□□□ 1.07
Atxn7Q8R4I1 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
Atxn7Q8R4I1 Gm15847-201ENSMUST00000121417 1065 ntBASIC21.74■■□□□ 1.07
Atxn7Q8R4I1 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC21.74■■□□□ 1.07
Atxn7Q8R4I1 AL672049.1-201ENSMUST00000197943 91 ntBASIC21.74■■□□□ 1.07
Atxn7Q8R4I1 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Atxn7Q8R4I1 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Atxn7Q8R4I1 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Atxn7Q8R4I1 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Atxn7Q8R4I1 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Atxn7Q8R4I1 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
Atxn7Q8R4I1 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Atxn7Q8R4I1 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC21.73■■□□□ 1.07
Atxn7Q8R4I1 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC21.73■■□□□ 1.07
Atxn7Q8R4I1 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC21.73■■□□□ 1.07
Atxn7Q8R4I1 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Atxn7Q8R4I1 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC21.73■■□□□ 1.07
Atxn7Q8R4I1 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC21.73■■□□□ 1.07
Atxn7Q8R4I1 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Atxn7Q8R4I1 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC21.73■■□□□ 1.07
Atxn7Q8R4I1 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC21.72■■□□□ 1.07
Atxn7Q8R4I1 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC21.72■■□□□ 1.07
Atxn7Q8R4I1 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC21.72■■□□□ 1.07
Atxn7Q8R4I1 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Atxn7Q8R4I1 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC21.72■■□□□ 1.07
Atxn7Q8R4I1 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Atxn7Q8R4I1 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC21.72■■□□□ 1.07
Atxn7Q8R4I1 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Atxn7Q8R4I1 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Atxn7Q8R4I1 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC21.72■■□□□ 1.07
Atxn7Q8R4I1 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Atxn7Q8R4I1 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC21.71■■□□□ 1.07
Atxn7Q8R4I1 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Retrieved 100 of 76,532 protein–RNA pairs in 19.7 ms