Protein–RNA interactions for Protein: Q8R4E9

Cdt1, DNA replication factor Cdt1, mousemouse

Predictions only

Length 557 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdt1Q8R4E9 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
Cdt1Q8R4E9 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Cdt1Q8R4E9 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Cdt1Q8R4E9 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Cdt1Q8R4E9 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Cdt1Q8R4E9 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
Cdt1Q8R4E9 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC18.1■□□□□ 0.49
Cdt1Q8R4E9 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
Cdt1Q8R4E9 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Cdt1Q8R4E9 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Cdt1Q8R4E9 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Cdt1Q8R4E9 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Cdt1Q8R4E9 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Cdt1Q8R4E9 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Cdt1Q8R4E9 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC18.09■□□□□ 0.49
Cdt1Q8R4E9 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Cdt1Q8R4E9 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Cdt1Q8R4E9 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Cdt1Q8R4E9 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Cdt1Q8R4E9 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Cdt1Q8R4E9 Gm37352-201ENSMUST00000193908 2181 ntBASIC18.09■□□□□ 0.49
Cdt1Q8R4E9 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
Cdt1Q8R4E9 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Cdt1Q8R4E9 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Cdt1Q8R4E9 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Cdt1Q8R4E9 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Cdt1Q8R4E9 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Cdt1Q8R4E9 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Cdt1Q8R4E9 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC18.08■□□□□ 0.48
Cdt1Q8R4E9 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC18.08■□□□□ 0.48
Cdt1Q8R4E9 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC18.08■□□□□ 0.48
Cdt1Q8R4E9 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Cdt1Q8R4E9 CT030146.1-201ENSMUST00000220919 217 ntBASIC18.08■□□□□ 0.48
Cdt1Q8R4E9 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Cdt1Q8R4E9 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Cdt1Q8R4E9 Gm32699-201ENSMUST00000221728 1988 ntBASIC18.08■□□□□ 0.48
Cdt1Q8R4E9 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC18.07■□□□□ 0.48
Cdt1Q8R4E9 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Cdt1Q8R4E9 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
Cdt1Q8R4E9 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
Cdt1Q8R4E9 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Cdt1Q8R4E9 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Cdt1Q8R4E9 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Cdt1Q8R4E9 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC18.07■□□□□ 0.48
Cdt1Q8R4E9 Gm8520-201ENSMUST00000186517 868 ntBASIC18.07■□□□□ 0.48
Cdt1Q8R4E9 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC18.07■□□□□ 0.48
Cdt1Q8R4E9 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Cdt1Q8R4E9 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
Cdt1Q8R4E9 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC18.07■□□□□ 0.48
Cdt1Q8R4E9 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Cdt1Q8R4E9 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Cdt1Q8R4E9 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Cdt1Q8R4E9 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Cdt1Q8R4E9 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC18.07■□□□□ 0.48
Cdt1Q8R4E9 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Cdt1Q8R4E9 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Cdt1Q8R4E9 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Cdt1Q8R4E9 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Cdt1Q8R4E9 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC18.06■□□□□ 0.48
Cdt1Q8R4E9 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC18.06■□□□□ 0.48
Cdt1Q8R4E9 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Cdt1Q8R4E9 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Cdt1Q8R4E9 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Cdt1Q8R4E9 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
Cdt1Q8R4E9 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Cdt1Q8R4E9 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Cdt1Q8R4E9 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
Cdt1Q8R4E9 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Cdt1Q8R4E9 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC18.05■□□□□ 0.48
Cdt1Q8R4E9 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC18.05■□□□□ 0.48
Cdt1Q8R4E9 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Cdt1Q8R4E9 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC18.05■□□□□ 0.48
Cdt1Q8R4E9 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Cdt1Q8R4E9 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC18.05■□□□□ 0.48
Cdt1Q8R4E9 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Cdt1Q8R4E9 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Cdt1Q8R4E9 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Cdt1Q8R4E9 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Cdt1Q8R4E9 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Cdt1Q8R4E9 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Cdt1Q8R4E9 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Cdt1Q8R4E9 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Cdt1Q8R4E9 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC18.04■□□□□ 0.48
Cdt1Q8R4E9 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
Cdt1Q8R4E9 Gm5784-201ENSMUST00000179344 2478 ntBASIC18.04■□□□□ 0.48
Cdt1Q8R4E9 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Cdt1Q8R4E9 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC18.04■□□□□ 0.48
Cdt1Q8R4E9 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC18.04■□□□□ 0.48
Cdt1Q8R4E9 Gm22325-201ENSMUST00000158904 308 ntBASIC18.04■□□□□ 0.48
Cdt1Q8R4E9 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
Cdt1Q8R4E9 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Cdt1Q8R4E9 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
Cdt1Q8R4E9 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Cdt1Q8R4E9 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Cdt1Q8R4E9 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Cdt1Q8R4E9 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Cdt1Q8R4E9 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Cdt1Q8R4E9 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Cdt1Q8R4E9 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
Cdt1Q8R4E9 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 21.2 ms