Protein–RNA interactions for Protein: Q8K4E0

Alms1, Alstrom syndrome protein 1 homolog, mousemouse

Predictions only

Length 3,251 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Alms1Q8K4E0 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Alms1Q8K4E0 Gm38342-201ENSMUST00000195710 2980 ntBASIC18.43■□□□□ 0.54
Alms1Q8K4E0 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Alms1Q8K4E0 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Alms1Q8K4E0 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
Alms1Q8K4E0 Gm2559-201ENSMUST00000201323 363 ntBASIC18.43■□□□□ 0.54
Alms1Q8K4E0 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Alms1Q8K4E0 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Alms1Q8K4E0 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Alms1Q8K4E0 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC18.43■□□□□ 0.54
Alms1Q8K4E0 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Alms1Q8K4E0 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
Alms1Q8K4E0 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
Alms1Q8K4E0 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC18.43■□□□□ 0.54
Alms1Q8K4E0 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Alms1Q8K4E0 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Alms1Q8K4E0 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Alms1Q8K4E0 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Alms1Q8K4E0 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Alms1Q8K4E0 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC18.42■□□□□ 0.54
Alms1Q8K4E0 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC18.42■□□□□ 0.54
Alms1Q8K4E0 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Alms1Q8K4E0 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC18.42■□□□□ 0.54
Alms1Q8K4E0 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Alms1Q8K4E0 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Alms1Q8K4E0 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC18.42■□□□□ 0.54
Alms1Q8K4E0 Gm43672-201ENSMUST00000199072 1731 ntBASIC18.42■□□□□ 0.54
Alms1Q8K4E0 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Alms1Q8K4E0 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Alms1Q8K4E0 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Alms1Q8K4E0 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC18.41■□□□□ 0.54
Alms1Q8K4E0 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
Alms1Q8K4E0 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC18.41■□□□□ 0.54
Alms1Q8K4E0 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC18.41■□□□□ 0.54
Alms1Q8K4E0 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Alms1Q8K4E0 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Alms1Q8K4E0 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Alms1Q8K4E0 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
Alms1Q8K4E0 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Alms1Q8K4E0 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
Alms1Q8K4E0 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Alms1Q8K4E0 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC18.41■□□□□ 0.54
Alms1Q8K4E0 Gm11249-201ENSMUST00000117071 859 ntBASIC18.41■□□□□ 0.54
Alms1Q8K4E0 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Alms1Q8K4E0 Gm6433-201ENSMUST00000118634 875 ntBASIC18.41■□□□□ 0.54
Alms1Q8K4E0 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
Alms1Q8K4E0 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Alms1Q8K4E0 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Alms1Q8K4E0 Gm10167-201ENSMUST00000150411 1479 ntBASIC18.4■□□□□ 0.54
Alms1Q8K4E0 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC18.4■□□□□ 0.54
Alms1Q8K4E0 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Alms1Q8K4E0 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Alms1Q8K4E0 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC18.4■□□□□ 0.54
Alms1Q8K4E0 Gm21596-201ENSMUST00000178049 1316 ntBASIC18.4■□□□□ 0.54
Alms1Q8K4E0 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
Alms1Q8K4E0 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Alms1Q8K4E0 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Alms1Q8K4E0 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Alms1Q8K4E0 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC18.39■□□□□ 0.53
Alms1Q8K4E0 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Alms1Q8K4E0 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
Alms1Q8K4E0 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC18.39■□□□□ 0.53
Alms1Q8K4E0 AC153881.2-201ENSMUST00000214877 204 ntBASIC18.39■□□□□ 0.53
Alms1Q8K4E0 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Alms1Q8K4E0 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Alms1Q8K4E0 Arhgef33-211ENSMUST00000225658 473 ntBASIC18.38■□□□□ 0.53
Alms1Q8K4E0 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
Alms1Q8K4E0 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Alms1Q8K4E0 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Alms1Q8K4E0 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC18.38■□□□□ 0.53
Alms1Q8K4E0 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Alms1Q8K4E0 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Alms1Q8K4E0 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC18.38■□□□□ 0.53
Alms1Q8K4E0 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Alms1Q8K4E0 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Alms1Q8K4E0 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
Alms1Q8K4E0 Mir1199-201ENSMUST00000117015 119 ntBASIC18.37■□□□□ 0.53
Alms1Q8K4E0 Gm11643-201ENSMUST00000119578 864 ntBASIC18.37■□□□□ 0.53
Alms1Q8K4E0 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Alms1Q8K4E0 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Alms1Q8K4E0 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Alms1Q8K4E0 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Alms1Q8K4E0 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC18.37■□□□□ 0.53
Alms1Q8K4E0 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
Alms1Q8K4E0 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Alms1Q8K4E0 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Alms1Q8K4E0 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Alms1Q8K4E0 Gm37055-201ENSMUST00000191866 133 ntBASIC18.36■□□□□ 0.53
Alms1Q8K4E0 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Alms1Q8K4E0 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Alms1Q8K4E0 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC18.36■□□□□ 0.53
Alms1Q8K4E0 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Alms1Q8K4E0 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Alms1Q8K4E0 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Alms1Q8K4E0 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
Alms1Q8K4E0 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC18.35■□□□□ 0.53
Alms1Q8K4E0 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC18.35■□□□□ 0.53
Alms1Q8K4E0 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
Alms1Q8K4E0 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC18.35■□□□□ 0.53
Alms1Q8K4E0 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 20.6 ms