Protein–RNA interactions for Protein: Q8K2Z2

Prpf39, Pre-mRNA-processing factor 39, mousemouse

Predictions only

Length 665 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf39Q8K2Z2 Rncr4-201ENSMUST00000194541 2234 ntBASIC19.45■□□□□ 0.7
Prpf39Q8K2Z2 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Prpf39Q8K2Z2 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Prpf39Q8K2Z2 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
Prpf39Q8K2Z2 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
Prpf39Q8K2Z2 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
Prpf39Q8K2Z2 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
Prpf39Q8K2Z2 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
Prpf39Q8K2Z2 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Prpf39Q8K2Z2 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Prpf39Q8K2Z2 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
Prpf39Q8K2Z2 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Prpf39Q8K2Z2 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Prpf39Q8K2Z2 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Prpf39Q8K2Z2 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Prpf39Q8K2Z2 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
Prpf39Q8K2Z2 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Prpf39Q8K2Z2 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Prpf39Q8K2Z2 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Prpf39Q8K2Z2 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
Prpf39Q8K2Z2 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC19.43■□□□□ 0.7
Prpf39Q8K2Z2 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Prpf39Q8K2Z2 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Prpf39Q8K2Z2 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
Prpf39Q8K2Z2 AV356131-201ENSMUST00000206201 750 ntBASIC19.43■□□□□ 0.7
Prpf39Q8K2Z2 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Prpf39Q8K2Z2 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Prpf39Q8K2Z2 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Prpf39Q8K2Z2 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Prpf39Q8K2Z2 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Prpf39Q8K2Z2 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Prpf39Q8K2Z2 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Prpf39Q8K2Z2 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
Prpf39Q8K2Z2 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Prpf39Q8K2Z2 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
Prpf39Q8K2Z2 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Prpf39Q8K2Z2 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Prpf39Q8K2Z2 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
Prpf39Q8K2Z2 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Prpf39Q8K2Z2 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Prpf39Q8K2Z2 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC19.42■□□□□ 0.7
Prpf39Q8K2Z2 Gm26971-201ENSMUST00000182423 1072 ntBASIC19.42■□□□□ 0.7
Prpf39Q8K2Z2 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Prpf39Q8K2Z2 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Prpf39Q8K2Z2 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Prpf39Q8K2Z2 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC19.42■□□□□ 0.7
Prpf39Q8K2Z2 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Prpf39Q8K2Z2 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Prpf39Q8K2Z2 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Prpf39Q8K2Z2 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC19.41■□□□□ 0.7
Prpf39Q8K2Z2 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Prpf39Q8K2Z2 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC19.41■□□□□ 0.7
Prpf39Q8K2Z2 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC19.41■□□□□ 0.7
Prpf39Q8K2Z2 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Prpf39Q8K2Z2 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Prpf39Q8K2Z2 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Prpf39Q8K2Z2 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Prpf39Q8K2Z2 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Prpf39Q8K2Z2 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
Prpf39Q8K2Z2 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Prpf39Q8K2Z2 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC19.41■□□□□ 0.7
Prpf39Q8K2Z2 Gm19094-201ENSMUST00000209791 1246 ntBASIC19.41■□□□□ 0.7
Prpf39Q8K2Z2 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC19.41■□□□□ 0.7
Prpf39Q8K2Z2 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
Prpf39Q8K2Z2 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Prpf39Q8K2Z2 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Prpf39Q8K2Z2 Gm43231-201ENSMUST00000202960 2258 ntBASIC19.41■□□□□ 0.7
Prpf39Q8K2Z2 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Prpf39Q8K2Z2 Golph3-205ENSMUST00000228671 2842 ntBASIC19.41■□□□□ 0.7
Prpf39Q8K2Z2 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC19.41■□□□□ 0.7
Prpf39Q8K2Z2 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Prpf39Q8K2Z2 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Prpf39Q8K2Z2 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Prpf39Q8K2Z2 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Prpf39Q8K2Z2 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC19.4■□□□□ 0.7
Prpf39Q8K2Z2 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Prpf39Q8K2Z2 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Prpf39Q8K2Z2 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Prpf39Q8K2Z2 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Prpf39Q8K2Z2 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC19.4■□□□□ 0.7
Prpf39Q8K2Z2 Gm7514-201ENSMUST00000209475 934 ntBASIC19.4■□□□□ 0.7
Prpf39Q8K2Z2 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Prpf39Q8K2Z2 Gm10655-201ENSMUST00000098658 1397 ntBASIC19.4■□□□□ 0.7
Prpf39Q8K2Z2 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Prpf39Q8K2Z2 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Prpf39Q8K2Z2 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Prpf39Q8K2Z2 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
Prpf39Q8K2Z2 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC19.4■□□□□ 0.7
Prpf39Q8K2Z2 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC19.4■□□□□ 0.7
Prpf39Q8K2Z2 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC19.39■□□□□ 0.7
Prpf39Q8K2Z2 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.7
Prpf39Q8K2Z2 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Prpf39Q8K2Z2 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC19.39■□□□□ 0.69
Prpf39Q8K2Z2 Gm10849-201ENSMUST00000100397 618 ntBASIC19.39■□□□□ 0.69
Prpf39Q8K2Z2 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Prpf39Q8K2Z2 Gm26571-201ENSMUST00000181399 666 ntBASIC19.39■□□□□ 0.69
Prpf39Q8K2Z2 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Prpf39Q8K2Z2 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
Prpf39Q8K2Z2 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Prpf39Q8K2Z2 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 25.5 ms