Protein–RNA interactions for Protein: Q8K0T0

Rtn1, Reticulon-1, mousemouse

Predictions only

Length 780 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtn1Q8K0T0 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Rtn1Q8K0T0 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Rtn1Q8K0T0 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Rtn1Q8K0T0 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC21.65■■□□□ 1.06
Rtn1Q8K0T0 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Rtn1Q8K0T0 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Rtn1Q8K0T0 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC21.65■■□□□ 1.06
Rtn1Q8K0T0 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Rtn1Q8K0T0 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC21.65■■□□□ 1.06
Rtn1Q8K0T0 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Rtn1Q8K0T0 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC21.64■■□□□ 1.06
Rtn1Q8K0T0 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
Rtn1Q8K0T0 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC21.64■■□□□ 1.06
Rtn1Q8K0T0 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
Rtn1Q8K0T0 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
Rtn1Q8K0T0 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.06
Rtn1Q8K0T0 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
Rtn1Q8K0T0 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Rtn1Q8K0T0 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC21.64■■□□□ 1.05
Rtn1Q8K0T0 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC21.64■■□□□ 1.05
Rtn1Q8K0T0 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
Rtn1Q8K0T0 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Rtn1Q8K0T0 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Rtn1Q8K0T0 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC21.64■■□□□ 1.05
Rtn1Q8K0T0 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Rtn1Q8K0T0 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Rtn1Q8K0T0 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC21.64■■□□□ 1.05
Rtn1Q8K0T0 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Rtn1Q8K0T0 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC21.63■■□□□ 1.05
Rtn1Q8K0T0 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC21.63■■□□□ 1.05
Rtn1Q8K0T0 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Rtn1Q8K0T0 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Rtn1Q8K0T0 Gm10655-201ENSMUST00000098658 1397 ntBASIC21.63■■□□□ 1.05
Rtn1Q8K0T0 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Rtn1Q8K0T0 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Rtn1Q8K0T0 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC21.63■■□□□ 1.05
Rtn1Q8K0T0 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Rtn1Q8K0T0 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Rtn1Q8K0T0 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC21.63■■□□□ 1.05
Rtn1Q8K0T0 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC21.63■■□□□ 1.05
Rtn1Q8K0T0 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC21.63■■□□□ 1.05
Rtn1Q8K0T0 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Rtn1Q8K0T0 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
Rtn1Q8K0T0 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Rtn1Q8K0T0 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC21.62■■□□□ 1.05
Rtn1Q8K0T0 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC21.62■■□□□ 1.05
Rtn1Q8K0T0 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Rtn1Q8K0T0 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Rtn1Q8K0T0 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Rtn1Q8K0T0 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Rtn1Q8K0T0 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC21.62■■□□□ 1.05
Rtn1Q8K0T0 Gm6420-201ENSMUST00000193885 723 ntBASIC21.62■■□□□ 1.05
Rtn1Q8K0T0 Gm19094-201ENSMUST00000209791 1246 ntBASIC21.62■■□□□ 1.05
Rtn1Q8K0T0 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Rtn1Q8K0T0 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC21.62■■□□□ 1.05
Rtn1Q8K0T0 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Rtn1Q8K0T0 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC21.61■■□□□ 1.05
Rtn1Q8K0T0 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Rtn1Q8K0T0 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC21.61■■□□□ 1.05
Rtn1Q8K0T0 Nespas-201ENSMUST00000143738 1083 ntBASIC21.61■■□□□ 1.05
Rtn1Q8K0T0 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Rtn1Q8K0T0 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Rtn1Q8K0T0 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC21.61■■□□□ 1.05
Rtn1Q8K0T0 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Rtn1Q8K0T0 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Rtn1Q8K0T0 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC21.6■■□□□ 1.05
Rtn1Q8K0T0 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Rtn1Q8K0T0 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC21.6■■□□□ 1.05
Rtn1Q8K0T0 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Rtn1Q8K0T0 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC21.6■■□□□ 1.05
Rtn1Q8K0T0 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC21.6■■□□□ 1.05
Rtn1Q8K0T0 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC21.6■■□□□ 1.05
Rtn1Q8K0T0 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC21.6■■□□□ 1.05
Rtn1Q8K0T0 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Rtn1Q8K0T0 Gm10167-201ENSMUST00000150411 1479 ntBASIC21.59■■□□□ 1.05
Rtn1Q8K0T0 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC21.59■■□□□ 1.05
Rtn1Q8K0T0 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Rtn1Q8K0T0 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Rtn1Q8K0T0 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC21.59■■□□□ 1.05
Rtn1Q8K0T0 Gm43231-201ENSMUST00000202960 2258 ntBASIC21.59■■□□□ 1.05
Rtn1Q8K0T0 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
Rtn1Q8K0T0 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Rtn1Q8K0T0 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC21.58■■□□□ 1.05
Rtn1Q8K0T0 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Rtn1Q8K0T0 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Rtn1Q8K0T0 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Rtn1Q8K0T0 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Rtn1Q8K0T0 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Rtn1Q8K0T0 Gm9885-202ENSMUST00000186234 2209 ntBASIC21.58■■□□□ 1.05
Rtn1Q8K0T0 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Rtn1Q8K0T0 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC21.58■■□□□ 1.05
Rtn1Q8K0T0 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC21.58■■□□□ 1.05
Rtn1Q8K0T0 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Rtn1Q8K0T0 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Rtn1Q8K0T0 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
Rtn1Q8K0T0 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
Rtn1Q8K0T0 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC21.58■■□□□ 1.04
Rtn1Q8K0T0 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Rtn1Q8K0T0 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Rtn1Q8K0T0 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Retrieved 100 of 76,532 protein–RNA pairs in 63.5 ms