Protein–RNA interactions for Protein: Q8CI96

Clip4, CAP-Gly domain-containing linker protein 4, mousemouse

Predictions only

Length 704 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clip4Q8CI96 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Clip4Q8CI96 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Clip4Q8CI96 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Clip4Q8CI96 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Clip4Q8CI96 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC18.8■□□□□ 0.6
Clip4Q8CI96 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
Clip4Q8CI96 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Clip4Q8CI96 Gm14281-201ENSMUST00000121700 1294 ntBASIC18.8■□□□□ 0.6
Clip4Q8CI96 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC18.8■□□□□ 0.6
Clip4Q8CI96 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Clip4Q8CI96 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC18.8■□□□□ 0.6
Clip4Q8CI96 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Clip4Q8CI96 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Clip4Q8CI96 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
Clip4Q8CI96 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Clip4Q8CI96 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Clip4Q8CI96 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Clip4Q8CI96 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Clip4Q8CI96 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Clip4Q8CI96 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Clip4Q8CI96 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Clip4Q8CI96 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC18.79■□□□□ 0.6
Clip4Q8CI96 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Clip4Q8CI96 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Clip4Q8CI96 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Clip4Q8CI96 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Clip4Q8CI96 Gm42642-201ENSMUST00000200683 355 ntBASIC18.79■□□□□ 0.6
Clip4Q8CI96 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Clip4Q8CI96 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Clip4Q8CI96 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC18.79■□□□□ 0.6
Clip4Q8CI96 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Clip4Q8CI96 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Clip4Q8CI96 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
Clip4Q8CI96 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
Clip4Q8CI96 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Clip4Q8CI96 Gm18688-201ENSMUST00000204695 1859 ntBASIC18.78■□□□□ 0.6
Clip4Q8CI96 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Clip4Q8CI96 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Clip4Q8CI96 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Clip4Q8CI96 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Clip4Q8CI96 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Clip4Q8CI96 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Clip4Q8CI96 Gm6627-201ENSMUST00000218299 2386 ntBASIC18.77■□□□□ 0.6
Clip4Q8CI96 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
Clip4Q8CI96 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC18.77■□□□□ 0.6
Clip4Q8CI96 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Clip4Q8CI96 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Clip4Q8CI96 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Clip4Q8CI96 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Clip4Q8CI96 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC18.77■□□□□ 0.59
Clip4Q8CI96 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Clip4Q8CI96 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Clip4Q8CI96 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.59
Clip4Q8CI96 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Clip4Q8CI96 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Clip4Q8CI96 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Clip4Q8CI96 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Clip4Q8CI96 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
Clip4Q8CI96 Gm35558-201ENSMUST00000222675 2219 ntBASIC18.76■□□□□ 0.59
Clip4Q8CI96 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Clip4Q8CI96 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC18.76■□□□□ 0.59
Clip4Q8CI96 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC18.76■□□□□ 0.59
Clip4Q8CI96 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC18.76■□□□□ 0.59
Clip4Q8CI96 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Clip4Q8CI96 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Clip4Q8CI96 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Clip4Q8CI96 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Clip4Q8CI96 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Clip4Q8CI96 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Clip4Q8CI96 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Clip4Q8CI96 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Clip4Q8CI96 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Clip4Q8CI96 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Clip4Q8CI96 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Clip4Q8CI96 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Clip4Q8CI96 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC18.75■□□□□ 0.59
Clip4Q8CI96 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Clip4Q8CI96 Gm9988-201ENSMUST00000069786 435 ntBASIC18.75■□□□□ 0.59
Clip4Q8CI96 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Clip4Q8CI96 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Clip4Q8CI96 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Clip4Q8CI96 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
Clip4Q8CI96 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Clip4Q8CI96 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Clip4Q8CI96 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Clip4Q8CI96 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
Clip4Q8CI96 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Clip4Q8CI96 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Clip4Q8CI96 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
Clip4Q8CI96 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Clip4Q8CI96 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
Clip4Q8CI96 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
Clip4Q8CI96 Gm45640-201ENSMUST00000210665 1896 ntBASIC18.74■□□□□ 0.59
Clip4Q8CI96 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Clip4Q8CI96 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Clip4Q8CI96 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Clip4Q8CI96 Gm42778-201ENSMUST00000199644 553 ntBASIC18.74■□□□□ 0.59
Clip4Q8CI96 Slc35b2-207ENSMUST00000226086 850 ntBASIC18.74■□□□□ 0.59
Clip4Q8CI96 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Clip4Q8CI96 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 19.9 ms