Protein–RNA interactions for Protein: Q8CH19

Csnka2ip, Casein kinase II subunit alpha'-interacting protein, mousemouse

Predictions only

Length 720 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Csnka2ipQ8CH19 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Csnka2ipQ8CH19 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Csnka2ipQ8CH19 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Csnka2ipQ8CH19 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Csnka2ipQ8CH19 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Csnka2ipQ8CH19 Gm37352-201ENSMUST00000193908 2181 ntBASIC17.65■□□□□ 0.42
Csnka2ipQ8CH19 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Csnka2ipQ8CH19 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC17.65■□□□□ 0.42
Csnka2ipQ8CH19 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC17.65■□□□□ 0.42
Csnka2ipQ8CH19 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Csnka2ipQ8CH19 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Csnka2ipQ8CH19 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Csnka2ipQ8CH19 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Csnka2ipQ8CH19 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
Csnka2ipQ8CH19 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Csnka2ipQ8CH19 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC17.65■□□□□ 0.42
Csnka2ipQ8CH19 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Csnka2ipQ8CH19 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Csnka2ipQ8CH19 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Csnka2ipQ8CH19 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Csnka2ipQ8CH19 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC17.64■□□□□ 0.41
Csnka2ipQ8CH19 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Csnka2ipQ8CH19 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
Csnka2ipQ8CH19 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC17.64■□□□□ 0.41
Csnka2ipQ8CH19 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC17.64■□□□□ 0.41
Csnka2ipQ8CH19 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Csnka2ipQ8CH19 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
Csnka2ipQ8CH19 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Csnka2ipQ8CH19 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Csnka2ipQ8CH19 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
Csnka2ipQ8CH19 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Csnka2ipQ8CH19 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Csnka2ipQ8CH19 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
Csnka2ipQ8CH19 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC17.63■□□□□ 0.41
Csnka2ipQ8CH19 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Csnka2ipQ8CH19 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Csnka2ipQ8CH19 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Csnka2ipQ8CH19 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Csnka2ipQ8CH19 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC17.63■□□□□ 0.41
Csnka2ipQ8CH19 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Csnka2ipQ8CH19 Gm26971-201ENSMUST00000182423 1072 ntBASIC17.63■□□□□ 0.41
Csnka2ipQ8CH19 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC17.63■□□□□ 0.41
Csnka2ipQ8CH19 Spcs1-207ENSMUST00000228767 1008 ntBASIC17.63■□□□□ 0.41
Csnka2ipQ8CH19 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Csnka2ipQ8CH19 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Csnka2ipQ8CH19 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
Csnka2ipQ8CH19 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
Csnka2ipQ8CH19 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Csnka2ipQ8CH19 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Csnka2ipQ8CH19 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Csnka2ipQ8CH19 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
Csnka2ipQ8CH19 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Csnka2ipQ8CH19 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Csnka2ipQ8CH19 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
Csnka2ipQ8CH19 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Csnka2ipQ8CH19 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC17.62■□□□□ 0.41
Csnka2ipQ8CH19 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC17.62■□□□□ 0.41
Csnka2ipQ8CH19 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Csnka2ipQ8CH19 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Csnka2ipQ8CH19 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Csnka2ipQ8CH19 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Csnka2ipQ8CH19 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Csnka2ipQ8CH19 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC17.62■□□□□ 0.41
Csnka2ipQ8CH19 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Csnka2ipQ8CH19 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
Csnka2ipQ8CH19 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Csnka2ipQ8CH19 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Csnka2ipQ8CH19 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC17.61■□□□□ 0.41
Csnka2ipQ8CH19 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC17.61■□□□□ 0.41
Csnka2ipQ8CH19 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC17.61■□□□□ 0.41
Csnka2ipQ8CH19 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Csnka2ipQ8CH19 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Csnka2ipQ8CH19 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
Csnka2ipQ8CH19 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC17.61■□□□□ 0.41
Csnka2ipQ8CH19 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Csnka2ipQ8CH19 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
Csnka2ipQ8CH19 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Csnka2ipQ8CH19 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC17.61■□□□□ 0.41
Csnka2ipQ8CH19 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC17.61■□□□□ 0.41
Csnka2ipQ8CH19 AC131586.2-201ENSMUST00000228370 1512 ntBASIC17.61■□□□□ 0.41
Csnka2ipQ8CH19 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Csnka2ipQ8CH19 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
Csnka2ipQ8CH19 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC17.6■□□□□ 0.41
Csnka2ipQ8CH19 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Csnka2ipQ8CH19 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Csnka2ipQ8CH19 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Csnka2ipQ8CH19 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
Csnka2ipQ8CH19 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Csnka2ipQ8CH19 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
Csnka2ipQ8CH19 Gm12669-201ENSMUST00000122162 1009 ntBASIC17.6■□□□□ 0.41
Csnka2ipQ8CH19 AC112142.1-201ENSMUST00000228796 918 ntBASIC17.6■□□□□ 0.41
Csnka2ipQ8CH19 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Csnka2ipQ8CH19 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Csnka2ipQ8CH19 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
Csnka2ipQ8CH19 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Csnka2ipQ8CH19 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Csnka2ipQ8CH19 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Csnka2ipQ8CH19 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Csnka2ipQ8CH19 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC17.6■□□□□ 0.41
Csnka2ipQ8CH19 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 51.2 ms