Protein–RNA interactions for Protein: Q8CG50

Rab43, Ras-related protein Rab-43, mousemouse

Predictions only

Length 210 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab43Q8CG50 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Rab43Q8CG50 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Rab43Q8CG50 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Rab43Q8CG50 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Rab43Q8CG50 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Rab43Q8CG50 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
Rab43Q8CG50 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Rab43Q8CG50 Dio3-201ENSMUST00000097228 1449 ntBASIC18.27■□□□□ 0.52
Rab43Q8CG50 Gm5643-201ENSMUST00000117081 966 ntBASIC18.27■□□□□ 0.52
Rab43Q8CG50 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC18.27■□□□□ 0.52
Rab43Q8CG50 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Rab43Q8CG50 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Rab43Q8CG50 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Rab43Q8CG50 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Rab43Q8CG50 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC18.27■□□□□ 0.51
Rab43Q8CG50 Iqck-206ENSMUST00000208658 2891 ntBASIC18.27■□□□□ 0.51
Rab43Q8CG50 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Rab43Q8CG50 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Rab43Q8CG50 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Rab43Q8CG50 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Rab43Q8CG50 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Rab43Q8CG50 Mir7071-201ENSMUST00000184847 69 ntBASIC18.26■□□□□ 0.51
Rab43Q8CG50 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC18.26■□□□□ 0.51
Rab43Q8CG50 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC18.26■□□□□ 0.51
Rab43Q8CG50 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Rab43Q8CG50 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
Rab43Q8CG50 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Rab43Q8CG50 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Rab43Q8CG50 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Rab43Q8CG50 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC18.26■□□□□ 0.51
Rab43Q8CG50 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Rab43Q8CG50 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Rab43Q8CG50 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
Rab43Q8CG50 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
Rab43Q8CG50 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Rab43Q8CG50 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC18.25■□□□□ 0.51
Rab43Q8CG50 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Rab43Q8CG50 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Rab43Q8CG50 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC18.25■□□□□ 0.51
Rab43Q8CG50 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Rab43Q8CG50 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC18.25■□□□□ 0.51
Rab43Q8CG50 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Rab43Q8CG50 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC18.24■□□□□ 0.51
Rab43Q8CG50 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Rab43Q8CG50 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Rab43Q8CG50 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC18.24■□□□□ 0.51
Rab43Q8CG50 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC18.24■□□□□ 0.51
Rab43Q8CG50 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
Rab43Q8CG50 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
Rab43Q8CG50 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Rab43Q8CG50 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Rab43Q8CG50 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC18.24■□□□□ 0.51
Rab43Q8CG50 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Rab43Q8CG50 Gm21596-201ENSMUST00000178049 1316 ntBASIC18.23■□□□□ 0.51
Rab43Q8CG50 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Rab43Q8CG50 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Rab43Q8CG50 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Rab43Q8CG50 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
Rab43Q8CG50 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
Rab43Q8CG50 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
Rab43Q8CG50 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Rab43Q8CG50 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Rab43Q8CG50 Mir6982-201ENSMUST00000184354 68 ntBASIC18.23■□□□□ 0.51
Rab43Q8CG50 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
Rab43Q8CG50 AC160393.1-201ENSMUST00000218378 1279 ntBASIC18.23■□□□□ 0.51
Rab43Q8CG50 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Rab43Q8CG50 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Rab43Q8CG50 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Rab43Q8CG50 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Rab43Q8CG50 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Rab43Q8CG50 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC18.22■□□□□ 0.51
Rab43Q8CG50 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC18.22■□□□□ 0.51
Rab43Q8CG50 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Rab43Q8CG50 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC18.22■□□□□ 0.51
Rab43Q8CG50 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Rab43Q8CG50 Gm18666-201ENSMUST00000190039 958 ntBASIC18.22■□□□□ 0.51
Rab43Q8CG50 Arhgef33-211ENSMUST00000225658 473 ntBASIC18.22■□□□□ 0.51
Rab43Q8CG50 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Rab43Q8CG50 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Rab43Q8CG50 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Rab43Q8CG50 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Rab43Q8CG50 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
Rab43Q8CG50 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
Rab43Q8CG50 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Rab43Q8CG50 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Rab43Q8CG50 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Rab43Q8CG50 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
Rab43Q8CG50 Gm34220-201ENSMUST00000223001 2709 ntBASIC18.22■□□□□ 0.51
Rab43Q8CG50 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC18.21■□□□□ 0.51
Rab43Q8CG50 Gm43672-201ENSMUST00000199072 1731 ntBASIC18.21■□□□□ 0.51
Rab43Q8CG50 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
Rab43Q8CG50 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Rab43Q8CG50 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Rab43Q8CG50 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Rab43Q8CG50 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
Rab43Q8CG50 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC18.21■□□□□ 0.51
Rab43Q8CG50 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC18.21■□□□□ 0.51
Rab43Q8CG50 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Rab43Q8CG50 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Rab43Q8CG50 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC18.21■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 18.7 ms