Protein–RNA interactions for Protein: Q8CDN8

Ccdc38, Coiled-coil domain-containing protein 38, mousemouse

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc38Q8CDN8 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
Ccdc38Q8CDN8 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Ccdc38Q8CDN8 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC20.81■□□□□ 0.92
Ccdc38Q8CDN8 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Ccdc38Q8CDN8 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Ccdc38Q8CDN8 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Ccdc38Q8CDN8 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Ccdc38Q8CDN8 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Ccdc38Q8CDN8 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Ccdc38Q8CDN8 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC20.81■□□□□ 0.92
Ccdc38Q8CDN8 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC20.81■□□□□ 0.92
Ccdc38Q8CDN8 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC20.81■□□□□ 0.92
Ccdc38Q8CDN8 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Ccdc38Q8CDN8 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Ccdc38Q8CDN8 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Ccdc38Q8CDN8 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Ccdc38Q8CDN8 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Ccdc38Q8CDN8 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Ccdc38Q8CDN8 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Ccdc38Q8CDN8 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Ccdc38Q8CDN8 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
Ccdc38Q8CDN8 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC20.8■□□□□ 0.92
Ccdc38Q8CDN8 Gm27032-201ENSMUST00000183124 1116 ntBASIC20.8■□□□□ 0.92
Ccdc38Q8CDN8 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
Ccdc38Q8CDN8 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
Ccdc38Q8CDN8 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Ccdc38Q8CDN8 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Ccdc38Q8CDN8 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC20.8■□□□□ 0.92
Ccdc38Q8CDN8 Gm7856-201ENSMUST00000117514 1493 ntBASIC20.8■□□□□ 0.92
Ccdc38Q8CDN8 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Ccdc38Q8CDN8 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC20.79■□□□□ 0.92
Ccdc38Q8CDN8 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
Ccdc38Q8CDN8 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Ccdc38Q8CDN8 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
Ccdc38Q8CDN8 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC20.79■□□□□ 0.92
Ccdc38Q8CDN8 Gm43060-201ENSMUST00000200621 289 ntBASIC20.79■□□□□ 0.92
Ccdc38Q8CDN8 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Ccdc38Q8CDN8 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
Ccdc38Q8CDN8 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC20.79■□□□□ 0.92
Ccdc38Q8CDN8 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Ccdc38Q8CDN8 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Ccdc38Q8CDN8 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Ccdc38Q8CDN8 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Ccdc38Q8CDN8 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Ccdc38Q8CDN8 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Ccdc38Q8CDN8 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Ccdc38Q8CDN8 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Ccdc38Q8CDN8 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Ccdc38Q8CDN8 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Ccdc38Q8CDN8 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Ccdc38Q8CDN8 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Ccdc38Q8CDN8 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC20.78■□□□□ 0.92
Ccdc38Q8CDN8 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Ccdc38Q8CDN8 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Ccdc38Q8CDN8 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Ccdc38Q8CDN8 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Ccdc38Q8CDN8 Gm38205-201ENSMUST00000192243 258 ntBASIC20.77■□□□□ 0.92
Ccdc38Q8CDN8 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Ccdc38Q8CDN8 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
Ccdc38Q8CDN8 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.92
Ccdc38Q8CDN8 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Ccdc38Q8CDN8 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.91
Ccdc38Q8CDN8 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC20.77■□□□□ 0.91
Ccdc38Q8CDN8 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Ccdc38Q8CDN8 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Ccdc38Q8CDN8 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Ccdc38Q8CDN8 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Ccdc38Q8CDN8 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
Ccdc38Q8CDN8 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Ccdc38Q8CDN8 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Ccdc38Q8CDN8 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Ccdc38Q8CDN8 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC20.76■□□□□ 0.91
Ccdc38Q8CDN8 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC20.76■□□□□ 0.91
Ccdc38Q8CDN8 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC20.76■□□□□ 0.91
Ccdc38Q8CDN8 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Ccdc38Q8CDN8 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC20.76■□□□□ 0.91
Ccdc38Q8CDN8 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Ccdc38Q8CDN8 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Ccdc38Q8CDN8 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Ccdc38Q8CDN8 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Ccdc38Q8CDN8 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC20.75■□□□□ 0.91
Ccdc38Q8CDN8 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
Ccdc38Q8CDN8 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC20.75■□□□□ 0.91
Ccdc38Q8CDN8 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Ccdc38Q8CDN8 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Ccdc38Q8CDN8 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC20.74■□□□□ 0.91
Ccdc38Q8CDN8 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Ccdc38Q8CDN8 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Ccdc38Q8CDN8 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Ccdc38Q8CDN8 Gm21168-201ENSMUST00000199646 1096 ntBASIC20.74■□□□□ 0.91
Ccdc38Q8CDN8 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Ccdc38Q8CDN8 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Ccdc38Q8CDN8 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Ccdc38Q8CDN8 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Ccdc38Q8CDN8 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
Ccdc38Q8CDN8 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Ccdc38Q8CDN8 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
Ccdc38Q8CDN8 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Ccdc38Q8CDN8 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Ccdc38Q8CDN8 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Retrieved 100 of 76,532 protein–RNA pairs in 22.3 ms