Protein–RNA interactions for Protein: Q8CC35

Synpo, Synaptopodin, mousemouse

Known RBP Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SynpoQ8CC35 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
SynpoQ8CC35 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SynpoQ8CC35 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
SynpoQ8CC35 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC18.06■□□□□ 0.48
SynpoQ8CC35 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SynpoQ8CC35 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SynpoQ8CC35 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
SynpoQ8CC35 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC18.06■□□□□ 0.48
SynpoQ8CC35 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
SynpoQ8CC35 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC18.06■□□□□ 0.48
SynpoQ8CC35 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC18.06■□□□□ 0.48
SynpoQ8CC35 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SynpoQ8CC35 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SynpoQ8CC35 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
SynpoQ8CC35 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SynpoQ8CC35 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SynpoQ8CC35 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
SynpoQ8CC35 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
SynpoQ8CC35 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
SynpoQ8CC35 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
SynpoQ8CC35 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
SynpoQ8CC35 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
SynpoQ8CC35 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
SynpoQ8CC35 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
SynpoQ8CC35 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
SynpoQ8CC35 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
SynpoQ8CC35 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
SynpoQ8CC35 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
SynpoQ8CC35 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
SynpoQ8CC35 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
SynpoQ8CC35 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
SynpoQ8CC35 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
SynpoQ8CC35 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC18.04■□□□□ 0.48
SynpoQ8CC35 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
SynpoQ8CC35 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
SynpoQ8CC35 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
SynpoQ8CC35 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
SynpoQ8CC35 Gm10602-201ENSMUST00000098239 609 ntBASIC18.04■□□□□ 0.48
SynpoQ8CC35 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
SynpoQ8CC35 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
SynpoQ8CC35 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
SynpoQ8CC35 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
SynpoQ8CC35 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
SynpoQ8CC35 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
SynpoQ8CC35 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
SynpoQ8CC35 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC18.03■□□□□ 0.48
SynpoQ8CC35 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC18.03■□□□□ 0.48
SynpoQ8CC35 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
SynpoQ8CC35 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
SynpoQ8CC35 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
SynpoQ8CC35 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
SynpoQ8CC35 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
SynpoQ8CC35 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
SynpoQ8CC35 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
SynpoQ8CC35 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
SynpoQ8CC35 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
SynpoQ8CC35 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
SynpoQ8CC35 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC18.03■□□□□ 0.48
SynpoQ8CC35 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
SynpoQ8CC35 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
SynpoQ8CC35 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
SynpoQ8CC35 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
SynpoQ8CC35 AA386476-201ENSMUST00000098781 1665 ntBASIC18.03■□□□□ 0.48
SynpoQ8CC35 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
SynpoQ8CC35 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
SynpoQ8CC35 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
SynpoQ8CC35 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
SynpoQ8CC35 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
SynpoQ8CC35 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC18.02■□□□□ 0.48
SynpoQ8CC35 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC18.02■□□□□ 0.48
SynpoQ8CC35 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
SynpoQ8CC35 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
SynpoQ8CC35 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.48
SynpoQ8CC35 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.47
SynpoQ8CC35 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.47
SynpoQ8CC35 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
SynpoQ8CC35 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
SynpoQ8CC35 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
SynpoQ8CC35 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
SynpoQ8CC35 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
SynpoQ8CC35 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
SynpoQ8CC35 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
SynpoQ8CC35 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC18.01■□□□□ 0.47
SynpoQ8CC35 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC18.01■□□□□ 0.47
SynpoQ8CC35 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC18.01■□□□□ 0.47
SynpoQ8CC35 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
SynpoQ8CC35 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
SynpoQ8CC35 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
SynpoQ8CC35 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
SynpoQ8CC35 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
SynpoQ8CC35 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC18■□□□□ 0.47
SynpoQ8CC35 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
SynpoQ8CC35 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC18■□□□□ 0.47
SynpoQ8CC35 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
SynpoQ8CC35 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
SynpoQ8CC35 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
SynpoQ8CC35 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
SynpoQ8CC35 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC18■□□□□ 0.47
SynpoQ8CC35 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
SynpoQ8CC35 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 27.5 ms