Protein–RNA interactions for Protein: Q8CA03

Slc46a2, Thymic stromal cotransporter protein, mousemouse

Predictions only

Length 479 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc46a2Q8CA03 Gm45906-201ENSMUST00000208911 1430 ntBASIC17.98■□□□□ 0.47
Slc46a2Q8CA03 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Slc46a2Q8CA03 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Slc46a2Q8CA03 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Slc46a2Q8CA03 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Slc46a2Q8CA03 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC17.98■□□□□ 0.47
Slc46a2Q8CA03 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC17.98■□□□□ 0.47
Slc46a2Q8CA03 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Slc46a2Q8CA03 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC17.98■□□□□ 0.47
Slc46a2Q8CA03 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Slc46a2Q8CA03 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Slc46a2Q8CA03 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Slc46a2Q8CA03 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Slc46a2Q8CA03 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Slc46a2Q8CA03 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Slc46a2Q8CA03 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Slc46a2Q8CA03 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Slc46a2Q8CA03 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Slc46a2Q8CA03 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Slc46a2Q8CA03 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Slc46a2Q8CA03 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Slc46a2Q8CA03 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Slc46a2Q8CA03 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
Slc46a2Q8CA03 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC17.97■□□□□ 0.47
Slc46a2Q8CA03 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC17.97■□□□□ 0.47
Slc46a2Q8CA03 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
Slc46a2Q8CA03 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC17.97■□□□□ 0.47
Slc46a2Q8CA03 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Slc46a2Q8CA03 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
Slc46a2Q8CA03 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
Slc46a2Q8CA03 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC17.96■□□□□ 0.47
Slc46a2Q8CA03 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Slc46a2Q8CA03 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC17.96■□□□□ 0.47
Slc46a2Q8CA03 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
Slc46a2Q8CA03 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Slc46a2Q8CA03 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Slc46a2Q8CA03 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Slc46a2Q8CA03 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Slc46a2Q8CA03 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.46
Slc46a2Q8CA03 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
Slc46a2Q8CA03 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
Slc46a2Q8CA03 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
Slc46a2Q8CA03 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Slc46a2Q8CA03 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Slc46a2Q8CA03 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Slc46a2Q8CA03 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Slc46a2Q8CA03 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC17.95■□□□□ 0.46
Slc46a2Q8CA03 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Slc46a2Q8CA03 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Slc46a2Q8CA03 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Slc46a2Q8CA03 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC17.95■□□□□ 0.46
Slc46a2Q8CA03 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Slc46a2Q8CA03 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Slc46a2Q8CA03 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
Slc46a2Q8CA03 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC17.95■□□□□ 0.46
Slc46a2Q8CA03 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
Slc46a2Q8CA03 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Slc46a2Q8CA03 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Slc46a2Q8CA03 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Slc46a2Q8CA03 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Slc46a2Q8CA03 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
Slc46a2Q8CA03 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC17.94■□□□□ 0.46
Slc46a2Q8CA03 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Slc46a2Q8CA03 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC17.94■□□□□ 0.46
Slc46a2Q8CA03 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Slc46a2Q8CA03 Gm5828-201ENSMUST00000071842 1860 ntBASIC17.93■□□□□ 0.46
Slc46a2Q8CA03 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Slc46a2Q8CA03 Gm43702-201ENSMUST00000198772 2546 ntBASIC17.93■□□□□ 0.46
Slc46a2Q8CA03 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Slc46a2Q8CA03 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Slc46a2Q8CA03 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Slc46a2Q8CA03 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Slc46a2Q8CA03 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
Slc46a2Q8CA03 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
Slc46a2Q8CA03 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC17.93■□□□□ 0.46
Slc46a2Q8CA03 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Slc46a2Q8CA03 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Slc46a2Q8CA03 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Slc46a2Q8CA03 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
Slc46a2Q8CA03 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
Slc46a2Q8CA03 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC17.93■□□□□ 0.46
Slc46a2Q8CA03 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Slc46a2Q8CA03 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Slc46a2Q8CA03 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC17.92■□□□□ 0.46
Slc46a2Q8CA03 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC17.92■□□□□ 0.46
Slc46a2Q8CA03 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Slc46a2Q8CA03 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Slc46a2Q8CA03 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Slc46a2Q8CA03 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Slc46a2Q8CA03 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
Slc46a2Q8CA03 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC17.91■□□□□ 0.46
Slc46a2Q8CA03 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Slc46a2Q8CA03 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Slc46a2Q8CA03 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
Slc46a2Q8CA03 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC17.91■□□□□ 0.46
Slc46a2Q8CA03 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Slc46a2Q8CA03 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC17.91■□□□□ 0.46
Slc46a2Q8CA03 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
Slc46a2Q8CA03 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Slc46a2Q8CA03 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 22.8 ms