Protein–RNA interactions for Protein: Q8C7R7

Rfx6, DNA-binding protein RFX6, mousemouse

Predictions only

Length 927 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx6Q8C7R7 Gm12251-201ENSMUST00000117893 792 ntBASIC19.03■□□□□ 0.64
Rfx6Q8C7R7 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC19.03■□□□□ 0.64
Rfx6Q8C7R7 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC19.03■□□□□ 0.64
Rfx6Q8C7R7 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Rfx6Q8C7R7 AC165080.2-201ENSMUST00000217491 1530 ntBASIC19.03■□□□□ 0.64
Rfx6Q8C7R7 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Rfx6Q8C7R7 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Rfx6Q8C7R7 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Rfx6Q8C7R7 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
Rfx6Q8C7R7 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Rfx6Q8C7R7 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Rfx6Q8C7R7 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
Rfx6Q8C7R7 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
Rfx6Q8C7R7 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
Rfx6Q8C7R7 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
Rfx6Q8C7R7 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC19.02■□□□□ 0.64
Rfx6Q8C7R7 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC19.02■□□□□ 0.64
Rfx6Q8C7R7 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Rfx6Q8C7R7 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Rfx6Q8C7R7 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Rfx6Q8C7R7 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Rfx6Q8C7R7 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC19.02■□□□□ 0.64
Rfx6Q8C7R7 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Rfx6Q8C7R7 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Rfx6Q8C7R7 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Rfx6Q8C7R7 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Rfx6Q8C7R7 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Rfx6Q8C7R7 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Rfx6Q8C7R7 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.63
Rfx6Q8C7R7 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
Rfx6Q8C7R7 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Rfx6Q8C7R7 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Rfx6Q8C7R7 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Rfx6Q8C7R7 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Rfx6Q8C7R7 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Rfx6Q8C7R7 AC140930.3-201ENSMUST00000222935 274 ntBASIC19.01■□□□□ 0.63
Rfx6Q8C7R7 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Rfx6Q8C7R7 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Rfx6Q8C7R7 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Rfx6Q8C7R7 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Rfx6Q8C7R7 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Rfx6Q8C7R7 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Rfx6Q8C7R7 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
Rfx6Q8C7R7 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Rfx6Q8C7R7 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC19■□□□□ 0.63
Rfx6Q8C7R7 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC19■□□□□ 0.63
Rfx6Q8C7R7 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Rfx6Q8C7R7 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Rfx6Q8C7R7 Flvcr1-202ENSMUST00000191946 1216 ntBASIC19■□□□□ 0.63
Rfx6Q8C7R7 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Rfx6Q8C7R7 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
Rfx6Q8C7R7 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Rfx6Q8C7R7 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Rfx6Q8C7R7 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Rfx6Q8C7R7 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC18.99■□□□□ 0.63
Rfx6Q8C7R7 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC18.99■□□□□ 0.63
Rfx6Q8C7R7 Gm5953-201ENSMUST00000220644 2616 ntBASIC18.99■□□□□ 0.63
Rfx6Q8C7R7 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Rfx6Q8C7R7 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Rfx6Q8C7R7 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Rfx6Q8C7R7 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Rfx6Q8C7R7 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Rfx6Q8C7R7 Gm35558-201ENSMUST00000222675 2219 ntBASIC18.98■□□□□ 0.63
Rfx6Q8C7R7 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
Rfx6Q8C7R7 Dmtn-210ENSMUST00000228824 2377 ntBASIC18.98■□□□□ 0.63
Rfx6Q8C7R7 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Rfx6Q8C7R7 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Rfx6Q8C7R7 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Rfx6Q8C7R7 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Rfx6Q8C7R7 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Rfx6Q8C7R7 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Rfx6Q8C7R7 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Rfx6Q8C7R7 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Rfx6Q8C7R7 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
Rfx6Q8C7R7 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Rfx6Q8C7R7 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Rfx6Q8C7R7 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Rfx6Q8C7R7 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Rfx6Q8C7R7 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
Rfx6Q8C7R7 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Rfx6Q8C7R7 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Rfx6Q8C7R7 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
Rfx6Q8C7R7 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Rfx6Q8C7R7 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Rfx6Q8C7R7 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Rfx6Q8C7R7 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Rfx6Q8C7R7 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Rfx6Q8C7R7 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Rfx6Q8C7R7 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC18.97■□□□□ 0.63
Rfx6Q8C7R7 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Rfx6Q8C7R7 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC18.97■□□□□ 0.63
Rfx6Q8C7R7 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC18.97■□□□□ 0.63
Rfx6Q8C7R7 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC18.97■□□□□ 0.63
Rfx6Q8C7R7 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
Rfx6Q8C7R7 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Rfx6Q8C7R7 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Rfx6Q8C7R7 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Rfx6Q8C7R7 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Rfx6Q8C7R7 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Rfx6Q8C7R7 Gm15853-202ENSMUST00000195518 2041 ntBASIC18.96■□□□□ 0.63
Retrieved 100 of 76,532 protein–RNA pairs in 17.9 ms