Protein–RNA interactions for Protein: Q8C6M1

Usp20, Ubiquitin carboxyl-terminal hydrolase 20, mousemouse

Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp20Q8C6M1 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC20.73■□□□□ 0.91
Usp20Q8C6M1 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Usp20Q8C6M1 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
Usp20Q8C6M1 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
Usp20Q8C6M1 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Usp20Q8C6M1 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC20.73■□□□□ 0.91
Usp20Q8C6M1 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Usp20Q8C6M1 Gm27275-201ENSMUST00000184318 272 ntBASIC20.72■□□□□ 0.91
Usp20Q8C6M1 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Usp20Q8C6M1 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Usp20Q8C6M1 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC20.72■□□□□ 0.91
Usp20Q8C6M1 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Usp20Q8C6M1 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Usp20Q8C6M1 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Usp20Q8C6M1 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC20.72■□□□□ 0.91
Usp20Q8C6M1 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Usp20Q8C6M1 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
Usp20Q8C6M1 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC20.71■□□□□ 0.91
Usp20Q8C6M1 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC20.71■□□□□ 0.91
Usp20Q8C6M1 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
Usp20Q8C6M1 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Usp20Q8C6M1 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Usp20Q8C6M1 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Usp20Q8C6M1 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Usp20Q8C6M1 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.91
Usp20Q8C6M1 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC20.7■□□□□ 0.9
Usp20Q8C6M1 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Usp20Q8C6M1 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Usp20Q8C6M1 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Usp20Q8C6M1 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Usp20Q8C6M1 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC20.7■□□□□ 0.9
Usp20Q8C6M1 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Usp20Q8C6M1 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Usp20Q8C6M1 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC20.7■□□□□ 0.9
Usp20Q8C6M1 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC20.69■□□□□ 0.9
Usp20Q8C6M1 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Usp20Q8C6M1 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC20.69■□□□□ 0.9
Usp20Q8C6M1 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC20.69■□□□□ 0.9
Usp20Q8C6M1 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Usp20Q8C6M1 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
Usp20Q8C6M1 Gm12896-201ENSMUST00000118430 226 ntBASIC20.69■□□□□ 0.9
Usp20Q8C6M1 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC20.69■□□□□ 0.9
Usp20Q8C6M1 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC20.69■□□□□ 0.9
Usp20Q8C6M1 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC20.69■□□□□ 0.9
Usp20Q8C6M1 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Usp20Q8C6M1 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Usp20Q8C6M1 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC20.69■□□□□ 0.9
Usp20Q8C6M1 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Usp20Q8C6M1 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Usp20Q8C6M1 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Usp20Q8C6M1 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Usp20Q8C6M1 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Usp20Q8C6M1 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Usp20Q8C6M1 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Usp20Q8C6M1 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Usp20Q8C6M1 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Usp20Q8C6M1 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Usp20Q8C6M1 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Usp20Q8C6M1 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Usp20Q8C6M1 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Usp20Q8C6M1 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Usp20Q8C6M1 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Usp20Q8C6M1 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Usp20Q8C6M1 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Usp20Q8C6M1 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
Usp20Q8C6M1 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Usp20Q8C6M1 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Usp20Q8C6M1 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC20.67■□□□□ 0.9
Usp20Q8C6M1 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Usp20Q8C6M1 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Usp20Q8C6M1 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
Usp20Q8C6M1 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
Usp20Q8C6M1 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC20.67■□□□□ 0.9
Usp20Q8C6M1 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Usp20Q8C6M1 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Usp20Q8C6M1 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
Usp20Q8C6M1 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Usp20Q8C6M1 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Usp20Q8C6M1 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Usp20Q8C6M1 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC20.66■□□□□ 0.9
Usp20Q8C6M1 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Usp20Q8C6M1 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC20.66■□□□□ 0.9
Usp20Q8C6M1 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Usp20Q8C6M1 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC20.66■□□□□ 0.9
Usp20Q8C6M1 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Usp20Q8C6M1 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Usp20Q8C6M1 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Usp20Q8C6M1 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
Usp20Q8C6M1 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Usp20Q8C6M1 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
Usp20Q8C6M1 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Usp20Q8C6M1 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
Usp20Q8C6M1 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Usp20Q8C6M1 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
Usp20Q8C6M1 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Usp20Q8C6M1 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
Usp20Q8C6M1 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
Usp20Q8C6M1 Gm45640-201ENSMUST00000210665 1896 ntBASIC20.64■□□□□ 0.9
Usp20Q8C6M1 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Usp20Q8C6M1 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 20.9 ms